DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4982 and CG13044

DIOPT Version :9

Sequence 1:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster


Alignment Length:143 Identity:45/143 - (31%)
Similarity:61/143 - (42%) Gaps:51/143 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKVVFLLCGVFAVLIQARPSYLPSYEHVEYAPSV-----------VGYESYALPAAVSHQSSTV 54
            ||| :|:|..:.|| ..|:|.:|.:...|..||:.           ||....::|.||||||.|.
  Fly     1 MFK-LFVLAALLAV-AAAKPGHLAAAPLVYSAPATTTVVQEPVLAKVGAVVKSVPTAVSHQSLTQ 63

  Fly    55 VHEKRPYWRPIVD------------HT-PILKAA-----YAPATSISY-APLGYAGNSAGWYEPG 100
            ||.     .|:|:            |: |:|.||     .||   ::| |||.|:...|      
  Fly    64 VHS-----TPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAP---VAYSAPLAYSAPVA------ 114

  Fly   101 IWGVSSY--PSIY 111
               .|||  |..|
  Fly   115 ---YSSYAAPLTY 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4982NP_648866.1 None
CG13044NP_648867.1 Retinin_C 36..93 CDD:282395 18/61 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.