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Protein Alignment CG4962 and CG13040
DIOPT Version :9
Sequence 1: | NP_648865.1 |
Gene: | CG4962 / 39793 |
FlyBaseID: | FBgn0036597 |
Length: | 123 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261936.1 |
Gene: | CG13040 / 39804 |
FlyBaseID: | FBgn0036608 |
Length: | 185 |
Species: | Drosophila melanogaster |
Alignment Length: | 160 |
Identity: | 43/160 - (26%) |
Similarity: | 59/160 - (36%) |
Gaps: | 66/160 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFKLIALISALCAVANAGVISPYSHGYGLGYGAALAP--------AYAAPAVISH---------- 47
||:.| |:||:|.....:| |:...:..|:|| .::||...||
Fly 1 MFRFI----AICALATIVAAAP---GFIEEHPVAVAPVVAKVGAVVHSAPLATSHQSFTQYHNQA 58
Fly 48 ------------APIIKSYA--APIVAH-----PVATSYANTYKV---------ATKAIPVVH-- 82
.|:||:.| .|:|.| ||....|....| ..|.:||||
Fly 59 VLTPVVKHVVPAVPVIKTVAPVVPVVKHVAPIVPVVKQVAPIVPVVKHVAPVVPVIKTVPVVHHQ 123
Fly 83 --AAPLVH---AVPAL----HSTSTYHGSY 103
.||.|| |||.: |:.| |.|:
Fly 124 TYVAPAVHHVAAVPVVKALPHAVS--HQSH 151
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG4962 | NP_648865.1 |
None |
CG13040 | NP_001261936.1 |
Retinin_C |
<40..94 |
CDD:282395 |
12/53 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR34931 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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