DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4962 and CG13040

DIOPT Version :10

Sequence 1:NP_648865.1 Gene:CG4962 / 39793 FlyBaseID:FBgn0036597 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_648875.1 Gene:CG13040 / 39804 FlyBaseID:FBgn0036608 Length:185 Species:Drosophila melanogaster


Alignment Length:160 Identity:43/160 - (26%)
Similarity:59/160 - (36%) Gaps:66/160 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLIALISALCAVANAGVISPYSHGYGLGYGAALAP--------AYAAPAVISH---------- 47
            ||:.|    |:||:|.....:|   |:...:..|:||        .::||...||          
  Fly     1 MFRFI----AICALATIVAAAP---GFIEEHPVAVAPVVAKVGAVVHSAPLATSHQSFTQYHNQA 58

  Fly    48 ------------APIIKSYA--APIVAH-----PVATSYANTYKV---------ATKAIPVVH-- 82
                        .|:||:.|  .|:|.|     ||....|....|         ..|.:||||  
  Fly    59 VLTPVVKHVVPAVPVIKTVAPVVPVVKHVAPIVPVVKQVAPIVPVVKHVAPVVPVIKTVPVVHHQ 123

  Fly    83 --AAPLVH---AVPAL----HSTSTYHGSY 103
              .||.||   |||.:    |:.|  |.|:
  Fly   124 TYVAPAVHHVAAVPVVKALPHAVS--HQSH 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4962NP_648865.1 None
CG13040NP_648875.1 PHA02030 <66..120 CDD:222843 13/53 (25%)

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