DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4962 and CG13063

DIOPT Version :9

Sequence 1:NP_648865.1 Gene:CG4962 / 39793 FlyBaseID:FBgn0036597 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_648869.1 Gene:CG13063 / 39797 FlyBaseID:FBgn0036601 Length:129 Species:Drosophila melanogaster


Alignment Length:140 Identity:46/140 - (32%)
Similarity:56/140 - (40%) Gaps:48/140 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLIALISALCAVANAGVISPYSHGYGLGYGAALAPAYAAPA---------------------- 43
            ||||:.| |||.|||   |..|     |..|.:.|  .|||||                      
  Fly     1 MFKLVVL-SALLAVA---VARP-----GHLYESPL--VYAAPAATTVVQERSLAKVGSVVSSIPT 54

  Fly    44 ---------VISHAPIIKSYAAPIVAHPVATSYANTYKV---ATKAIPVVH---AAPLVHAVPAL 93
                     |.||:.:::...||:|......|||....|   |..|.||||   |||:||...|.
  Fly    55 SVSHQSQSVVHSHSHVVEDIVAPVVKSTPVVSYAAAAPVVHTAYAAAPVVHTSYAAPVVHTSYAA 119

  Fly    94 HSTSTYHGSY 103
            .|...|:.|:
  Fly   120 ASPVVYNSSW 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4962NP_648865.1 None
CG13063NP_648869.1 rne <11..124 CDD:236766 36/122 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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