DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4962 and CG13044

DIOPT Version :9

Sequence 1:NP_648865.1 Gene:CG4962 / 39793 FlyBaseID:FBgn0036597 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster


Alignment Length:151 Identity:41/151 - (27%)
Similarity:58/151 - (38%) Gaps:51/151 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLIALISALCAVANAGVISPYSHGYGLGYGAALAPAYAAPA---------------------- 43
            ||||..| :||.|||.|   .|       |:.||....|:|||                      
  Fly     1 MFKLFVL-AALLAVAAA---KP-------GHLAAAPLVYSAPATTTVVQEPVLAKVGAVVKSVPT 54

  Fly    44 VISHAPIIKSYAAPIVAHPVATSYANTYKVATKAIPVVHAAPLV-------HAVPALHSTSTYHG 101
            .:||..:.:.::.|:|...||.....|   |..:.||:.|||:|       ::.|..:|....:.
  Fly    55 AVSHQSLTQVHSTPVVEDVVAPVVKTT---AVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVAYS 116

  Fly   102 SYGGYGSYG--------LGYA 114
            ||....:|.        |.||
  Fly   117 SYAAPLTYSAPVAYSAPLSYA 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4962NP_648865.1 None
CG13044NP_648867.1 Retinin_C 36..93 CDD:282395 11/59 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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