DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4950 and igfals

DIOPT Version :9

Sequence 1:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_003198203.1 Gene:igfals / 570758 ZFINID:ZDB-GENE-061009-25 Length:614 Species:Danio rerio


Alignment Length:493 Identity:125/493 - (25%)
Similarity:207/493 - (41%) Gaps:89/493 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DEYDSMGYMDVNEAFCTVTGFTVTHS-----------QNVVIKNIPPGNMVK-----FMKFYEST 81
            |:|.    :::| .:|:...||...|           ...:..|:|.|...|     |:....|.
Zfish    58 DDYS----LELN-VYCSTRNFTQVPSDIPLSTRSLWLDGNLFSNLPAGAFEKLTNLEFLNLQSSL 117

  Fly    82 LLYMPFHLFETFPYLKTLDVSNTNILELTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMR 146
            |:.:..|.|.....|..|.:...|:..|:...|...|||..|:|..|.:..|...:|.|.:.:..
Zfish   118 LVSLDAHAFRGLNSLAHLHLERNNLRSLSGLVFQGTSNLATLSLNNNQMFRIDDRLFAGMSHMWL 182

  Fly   147 LDLSYNEISSLSVNAFCGLHTISQIYLTGNLLKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFR 211
            |:|.:|.:|.|....|..||.:.::.|.||.|..|...:|:....|:::...||.|..|:..||.
Zfish   183 LNLGWNLLSVLPETGFQDLHGLRELILAGNRLAYLQPQLFQGLNELKELDLTGNYLKVIKANVFL 247

  Fly   212 NMRRIKEVNLSNNRLIFIHPDTFADAASLENLVLSYNELKNFQLTEKNIV-----HQLHLDNNYL 271
            .:.:::::.|..|:::.:.|..|....||..|.||.|.|.  .|.::..:     |.|.|.||.:
Zfish   248 KLPKLQKLYLGQNQIVTVAPRAFVGMKSLRWLDLSRNRLT--VLHDETFIGLQSLHVLRLSNNSI 310

  Fly   272 TNLTINATRFVR------ASHNQISELFLH--QSL-HIETLDLSANKL--SSISNITNITHMLYL 325
            .:|.....|.::      ..||||..|.:.  :.| |:|.|:|..|:|  :.:.....:.|:..:
Zfish   311 NSLRPGTFRDLQYLEELCLYHNQIRALGVRVFEGLGHLEVLNLENNRLQEARMGTFMGLNHLAVM 375

  Fly   326 DVSDNPIGPLNISTFSQLKRLRGLNLRG--------------TGIREL-----KFGMFSKQKY-- 369
            .::.:....|....|..|.:|..::|..              ||:|.|     ...:..:|.:  
Zfish   376 KLTGSCFHSLPDQVFKGLSKLHSIHLDRSCLTKVSSQSFSGLTGLRRLFLQHNNISLVERQSFVE 440

  Fly   370 ---LEELDLSFNNLTILNLDMFVPYLTNLKKFLIDGNGLTELQGNRTFSEAFPQLQKLG---VSR 428
               |::|||.||.||.:..:.|.. |.||...|:.||.|..|.     :||...||.|.   :|.
Zfish   441 LQRLQQLDLRFNKLTTITSNTFYG-LKNLDYLLLSGNLLHNLP-----AEALLPLQHLSWLDLSG 499

  Fly   429 NRF------------NCSYLH---HLLI--PPSLPESV 449
            |:.            ...||:   ::|:  |.|:|||:
Zfish   500 NKLELILNATIYMLPRLRYLNLKDNILVNLPVSIPESL 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380 5/22 (23%)
LRR_8 118..178 CDD:290566 20/59 (34%)
leucine-rich repeat 120..143 CDD:275380 7/22 (32%)
leucine-rich repeat 144..167 CDD:275380 7/22 (32%)
leucine-rich repeat 168..191 CDD:275380 6/22 (27%)
LRR_8 192..250 CDD:290566 17/57 (30%)
leucine-rich repeat 192..215 CDD:275380 7/22 (32%)
LRR_RI <207..432 CDD:238064 68/279 (24%)
leucine-rich repeat 216..239 CDD:275380 4/22 (18%)
leucine-rich repeat 240..299 CDD:275380 20/72 (28%)
LRR_8 299..356 CDD:290566 13/72 (18%)
leucine-rich repeat 300..321 CDD:275380 5/22 (23%)
leucine-rich repeat 322..345 CDD:275380 3/22 (14%)
LRR_8 344..405 CDD:290566 22/84 (26%)
leucine-rich repeat 346..365 CDD:275380 6/37 (16%)
leucine-rich repeat 370..394 CDD:275380 10/23 (43%)
leucine-rich repeat 395..420 CDD:275380 8/24 (33%)
igfalsXP_003198203.1 LRRNT 48..81 CDD:279764 7/27 (26%)
leucine-rich repeat 65..83 CDD:275380 5/18 (28%)
leucine-rich repeat 84..107 CDD:275380 4/22 (18%)
LRR_8 85..142 CDD:290566 11/56 (20%)
leucine-rich repeat 108..131 CDD:275380 5/22 (23%)
LRR_8 131..214 CDD:290566 25/82 (30%)
leucine-rich repeat 132..155 CDD:275380 5/22 (23%)
leucine-rich repeat 156..203 CDD:275380 14/46 (30%)
leucine-rich repeat 204..227 CDD:275380 6/22 (27%)
LRR_RI <219..456 CDD:238064 57/238 (24%)
LRR_8 227..286 CDD:290566 17/58 (29%)
leucine-rich repeat 228..251 CDD:275380 7/22 (32%)
leucine-rich repeat 252..275 CDD:275380 4/22 (18%)
LRR_8 274..334 CDD:290566 17/61 (28%)
leucine-rich repeat 276..299 CDD:275380 7/24 (29%)
leucine-rich repeat 300..323 CDD:275380 7/22 (32%)
leucine-rich repeat 324..347 CDD:275380 6/22 (27%)
leucine-rich repeat 348..369 CDD:275380 5/20 (25%)
LRR_8 371..430 CDD:290566 10/58 (17%)
leucine-rich repeat 396..419 CDD:275380 2/22 (9%)
LRR_8 418..478 CDD:290566 20/60 (33%)
leucine-rich repeat 420..443 CDD:275380 3/22 (14%)
leucine-rich repeat 444..467 CDD:275380 10/23 (43%)
LRR_8 466..524 CDD:290566 16/62 (26%)
leucine-rich repeat 468..486 CDD:275380 7/22 (32%)
leucine-rich repeat 492..515 CDD:275380 3/22 (14%)
leucine-rich repeat 516..540 CDD:275380 8/22 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BF9C
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.770

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