DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4950 and Gp150

DIOPT Version :9

Sequence 1:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster


Alignment Length:501 Identity:126/501 - (25%)
Similarity:215/501 - (42%) Gaps:57/501 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EAFCTVTGFTVTHSQNVVIKNIPPGNMVKFMKFYESTLLYMPFHLFETFPYL------KTLDVSN 103
            |||..:......:..:|.:..|.|...|...|....|:......:..:..||      :.||.|.
  Fly   335 EAFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSR 399

  Fly   104 TNILELTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTI 168
            .|::||...|||..||:.|:||:.|:|..:....|....:|..||||||.::.|..:.|.|. |:
  Fly   400 NNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGT-TL 463

  Fly   169 SQIYLTGNLLKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDT 233
            |.::|..|   ..:.|:....:.|:::....|.:..:...:|..|..:..:||..|.:..|.||:
  Fly   464 SILHLKYN---TFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDS 525

  Fly   234 FADAASLENLVLSYNELKN------FQLTEKNIVH--------QLHLDN--NYLTNLTINATRFV 282
            |....:|.::.||.|:|..      |:.:|.:::.        ||..|.  :|....|:   .::
  Fly   526 FLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTV---YYL 587

  Fly   283 RASHNQISELFLHQSL----HIETLDLSANKLSSISN--ITNITHMLYLDVSDNPIGPLNISTFS 341
            ..|:..|..|. |::.    |:.||.|:.|.::.:..  .|.:..::.||:|:|.|..::...|.
  Fly   588 DISNCAIGPLG-HKAFSTMPHLTTLKLAWNNINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFM 651

  Fly   342 QLKRLRGLNLRGTGIRELKFGMFSKQKYLEELDLSFNNLTIL--NLDMFVPY--LTNLKKFLIDG 402
            ....|..|:|.|..|..|...:|.....|..||::...||.|  :.|:...|  ..:|:.|...|
  Fly   652 DNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNASG 716

  Fly   403 NGLTELQGNRTFSEAFPQLQKLGVSRNRFNC--------SY--LHHLLIPPSLPESVVLNIEPDT 457
            |.:.::.....  ::|..|:.|.::.|...|        ||  |...:.|..||  |:.|:|.|.
  Fly   717 NLIKKISSEDV--KSFKNLRSLDITNNPLKCTPDFQEFISYVTLQMQMTPKRLP--VLANLEDDA 777

  Fly   458 NLDETPHIRDVSCISQSQEV---VNASFTAEESKLESQIQMLSKQL 500
            .:.:...:......|.:.||   ...|...:|.|.:|....|.|:|
  Fly   778 TIVQLETLAQAGWSSLAHEVCKHAEGSDLLDEKKADSAEAKLEKRL 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380 10/28 (36%)
LRR_8 118..178 CDD:290566 22/59 (37%)
leucine-rich repeat 120..143 CDD:275380 6/22 (27%)
leucine-rich repeat 144..167 CDD:275380 10/22 (45%)
leucine-rich repeat 168..191 CDD:275380 4/22 (18%)
LRR_8 192..250 CDD:290566 15/57 (26%)
leucine-rich repeat 192..215 CDD:275380 4/22 (18%)
LRR_RI <207..432 CDD:238064 60/250 (24%)
leucine-rich repeat 216..239 CDD:275380 7/22 (32%)
leucine-rich repeat 240..299 CDD:275380 16/78 (21%)
LRR_8 299..356 CDD:290566 16/58 (28%)
leucine-rich repeat 300..321 CDD:275380 5/22 (23%)
leucine-rich repeat 322..345 CDD:275380 6/22 (27%)
LRR_8 344..405 CDD:290566 19/64 (30%)
leucine-rich repeat 346..365 CDD:275380 6/18 (33%)
leucine-rich repeat 370..394 CDD:275380 8/27 (30%)
leucine-rich repeat 395..420 CDD:275380 5/24 (21%)
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 9/41 (22%)
leucine-rich repeat 343..366 CDD:275380 4/22 (18%)
leucine-rich repeat 367..391 CDD:275380 3/23 (13%)
LRR_RI <374..619 CDD:238064 66/252 (26%)
LRR_8 390..450 CDD:290566 24/59 (41%)
leucine-rich repeat 393..415 CDD:275380 9/21 (43%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..483 CDD:275380 15/46 (33%)
leucine-rich repeat 463..481 CDD:275380 4/20 (20%)
LRR_8 484..542 CDD:290566 15/57 (26%)
leucine-rich repeat 484..507 CDD:275380 4/22 (18%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..569 CDD:275380 7/36 (19%)
leucine-rich repeat 556..583 CDD:275380 4/26 (15%)
leucine-rich repeat 570..607 CDD:275380 8/40 (20%)
LRR_RI <586..745 CDD:238064 39/161 (24%)
LRR_8 606..666 CDD:290566 16/59 (27%)
leucine-rich repeat 608..631 CDD:275380 5/22 (23%)
leucine-rich repeat 632..655 CDD:275380 6/22 (27%)
leucine-rich repeat 656..674 CDD:275380 6/17 (35%)
leucine-rich repeat 733..745 CDD:275378 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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