DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4950 and CG5096

DIOPT Version :9

Sequence 1:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster


Alignment Length:556 Identity:120/556 - (21%)
Similarity:219/556 - (39%) Gaps:134/556 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FCTVTGFTVTHSQNVVIKNIPPGNMVKFM--KFYESTLLYMPFHLFETFPYLKTL-------DVS 102
            ||.|.......:::.......|...:|.:  |..:....|:..:|.:....|:..       |::
  Fly    14 FCIVLSQVSGQTKDETTTTETPKEKIKVIDSKLCKKCNCYIDTNLLDCSEKLQDWLSAEDWEDLT 78

  Fly   103 NTNILELTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMRLD-----LSYNEISSLSVNAF 162
            |.|::..|            :||.:|||||:.        :|.:.|     |:.|:|.|:||.||
  Fly    79 NGNVVFKT------------INLEHNNLTSVP--------ILPKYDVENLYLANNQIDSISVGAF 123

  Fly   163 CGLHTISQIYLTGNLL--KELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNR 225
            ..|..:..:.|:.|.|  |.|..|:||.               ....:.|.::..:|.:||..|.
  Fly   124 QNLTELVTLDLSHNRLTSKVLVPDVFKG---------------PFTVQDFESLENLKTLNLGYND 173

  Fly   226 LIFIHPDTFADAASLENLVLSYNELKNFQLTEKNIVHQLHLDNNYLTNLTINATRFVRASHNQIS 290
            |..:..|.|.....:|.|||..|..        :::.|  |....::.|  .:.:.:..|:.:|.
  Fly   174 LHSLDADLFEHIPHIEELVLCSNSF--------HVIDQ--LSETAISGL--QSLKILDVSYMEID 226

  Fly   291 EL---FLHQSLHIETLDLSANKLS----SISNITNITHMLYLDVSDNPIGPL-NISTFSQLKRLR 347
            :|   .||....:|....:.|..:    ::...||:|.::   :::|||..| ..:.|..|.:|.
  Fly   227 DLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTSLV---LNENPIENLIGDNVFPPLTKLT 288

  Fly   348 GLNLR-GTGIRELKFGMFSKQKYLEELDLSFNNLTILNLDMFVPYLTNLKKFLIDGNGLTE-LQG 410
            .|::. .:.:.::..|.||:.:.|.||.||.|.|  ||              .||...|:: :.|
  Fly   289 HLSMTFMSKLYKIGPGAFSELQSLTELILSDNKL--LN--------------EIDEEALSKNVTG 337

  Fly   411 NRTFSEAFPQLQKLGVSRNRFNCSYLHHLLIPPSLPESVVLNIEPDTNLDETPHIRDVSCISQSQ 475
            .:...  :|.|:|:.::    ||:.       .:||:.:::..:....||  ......:|...:.
  Fly   338 GQYLD--YPPLEKVYLN----NCNV-------STLPKELLVRWDKLKALD--LRFNPWNCDESND 387

  Fly   476 EVVNASFTAEESKLESQIQMLSKQLDIVGSHSKN--LELHLAFMQIFAYVMGGLVLVG--VVSLI 536
            .::|...    .::.....:|:|.:...|.:..|  ..|.:|...:.....|.|:.||  ||.||
  Fly   388 FLINVLI----DRINKTTPVLAKDVKCGGPNKLNDVTLLRVANEHMIESSTGSLIWVGLLVVLLI 448

  Fly   537 TL-----RYLKNQR--------------SGRYDRSS 553
            .:     .|:..:|              |..|:|:|
  Fly   449 AVPTIIGAYVMKRRGCFGVFRRHDSGASSALYNRTS 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380 5/29 (17%)
LRR_8 118..178 CDD:290566 20/64 (31%)
leucine-rich repeat 120..143 CDD:275380 7/22 (32%)
leucine-rich repeat 144..167 CDD:275380 11/27 (41%)
leucine-rich repeat 168..191 CDD:275380 8/24 (33%)
LRR_8 192..250 CDD:290566 13/57 (23%)
leucine-rich repeat 192..215 CDD:275380 1/22 (5%)
LRR_RI <207..432 CDD:238064 53/234 (23%)
leucine-rich repeat 216..239 CDD:275380 7/22 (32%)
leucine-rich repeat 240..299 CDD:275380 13/61 (21%)
LRR_8 299..356 CDD:290566 13/62 (21%)
leucine-rich repeat 300..321 CDD:275380 4/24 (17%)
leucine-rich repeat 322..345 CDD:275380 6/23 (26%)
LRR_8 344..405 CDD:290566 16/61 (26%)
leucine-rich repeat 346..365 CDD:275380 3/19 (16%)
leucine-rich repeat 370..394 CDD:275380 9/23 (39%)
leucine-rich repeat 395..420 CDD:275380 4/25 (16%)
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064 89/389 (23%)
leucine-rich repeat 85..104 CDD:275380 9/38 (24%)
LRR_8 105..174 CDD:290566 22/83 (27%)
leucine-rich repeat 105..128 CDD:275380 9/22 (41%)
leucine-rich repeat 129..163 CDD:275380 9/48 (19%)
LRR_8 163..222 CDD:290566 15/70 (21%)
leucine-rich repeat 164..187 CDD:275380 7/22 (32%)
leucine-rich repeat 188..214 CDD:275380 8/37 (22%)
leucine-rich repeat 215..238 CDD:275380 5/22 (23%)
leucine-rich repeat 239..261 CDD:275380 2/21 (10%)
LRR_8 260..322 CDD:290566 20/64 (31%)
leucine-rich repeat 262..286 CDD:275380 7/26 (27%)
leucine-rich repeat 287..311 CDD:275380 5/23 (22%)
leucine-rich repeat 346..369 CDD:275380 6/33 (18%)
leucine-rich repeat 370..388 CDD:275380 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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