DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4950 and lron-15

DIOPT Version :10

Sequence 1:NP_648855.2 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_495322.3 Gene:lron-15 / 174079 WormBaseID:WBGene00016974 Length:1275 Species:Caenorhabditis elegans


Alignment Length:552 Identity:130/552 - (23%)
Similarity:243/552 - (44%) Gaps:93/552 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TVTGFTVTHSQNVVIKNIPPGNMVKFMKFYESTLLYMPFHLFETFPYLKTLDVSNTNILELTRNA 113
            |:|..|.::.:|:...::....::|.          :|..|:: .|.|..|.:.:.|:.|:.|:|
 Worm   620 TITSMTFSNLRNLRYLDLSHNRIIKI----------LPSALYQ-LPALDVLHLDHNNLNEIDRDA 673

  Fly   114 FSAASNLTYLNLAYNNLTSIQTSVFIGA-NVLMRLDLSYNEISSLSVNAFCGLHTISQIYLTGNL 177
            |.:.|:|..|.|::|........ |:|: :.:.:||||.|:|:.:.:  ||....|.::.|..|.
 Worm   674 FRSFSDLQSLKLSHNAFRRFSCE-FLGSISQVHQLDLSSNQINEIDI--FCIARGIRKLSLASNS 735

  Fly   178 LKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDTFADAASLEN 242
            :::::..:.:|...|..:....|.:..:..:.|...|::..:.||:|.:..:...||....||..
 Worm   736 VEKINRKLLQDATELTSIDISHNGIIDVDSDAFCECRKLSHIKLSHNYIRNLWKGTFQYQESLHT 800

  Fly   243 LVLSYNELKNFQ--LTEKNIVHQLHLDNNYLTNLTINATRFVRAS-------HNQI-----SELF 293
            |.:|:|::....  ...||.:.|||::||.|:.:.:.|.....||       ||.|     |:|.
 Worm   801 LDISFNDILFLHQGTFGKNNILQLHVNNNKLSRIPLEALSSTMASLHLLDLAHNNIKIVDSSQLT 865

  Fly   294 LHQSLHIETLDLSANKLSSISN--ITNITHMLYLDVSDNPIGPLNISTFSQLKR-LRGLNLRGTG 355
            ...:|.|  |..:.||:.||.:  ..|:..:..||:|:||:...:.:.|..|.. :..:|:..||
 Worm   866 SFGNLSI--LSFANNKVDSIEDGAFENLLSLKILDLSNNPVTSWSPTAFRDLSHSISSINMANTG 928

  Fly   356 IREL-KFGMFSKQKY---------LEE-----------LDLSFNNLTILNLDMFVPYLTNLKKFL 399
            :..: ||...|.|..         |.|           ||:|.|||..::...|.| |.:||:..
 Worm   929 LFSMPKFSHRSIQSLNISCNKIYELSEKDLAPLTKVVALDISHNNLKQISSMAFEP-LIHLKQLN 992

  Fly   400 IDGNGLTELQGNRTFSEAFPQLQKLGVSRNRFNCSYLHHLL-IPPS--------LPESVVLNIEP 455
            :..|.:|.|.     :|...||.||    ...:.|.:..|| :|.|        |....:.|| |
 Worm   993 VSANPITHLT-----NEHIQQLYKL----ETLHVSDMPFLLRLPDSHAFGQMNNLKHFFLYNI-P 1047

  Fly   456 D--------TNLDETPHIRDVSCISQSQEVVNASFTAEESKLESQIQMLSKQLD--IVGSHSK-- 508
            |        :.|...|.:..: .:...:..::..|...:::|...:.:..:.|.  .||:.:.  
 Worm  1048 DMARPYQISSILSNLPPLHTI-YVDIKESALDRQFYTADTRLLRHLVVAGRNLTKIEVGAFATIR 1111

  Fly   509 ----NLELHLAFMQIF-AYVMGGLVLVGVVSL 535
                .:|:|.:.::.| :.:...|..:.::||
 Worm  1112 GFRVRIEIHNSSIEEFPSRIFDTLTGISILSL 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_648855.2 LRR 96..411 CDD:443914 94/353 (27%)
leucine-rich repeat 96..119 CDD:275380 7/22 (32%)
leucine-rich repeat 120..143 CDD:275380 6/23 (26%)
leucine-rich repeat 144..167 CDD:275380 8/22 (36%)
leucine-rich repeat 168..191 CDD:275380 4/22 (18%)
leucine-rich repeat 192..215 CDD:275380 3/22 (14%)
leucine-rich repeat 216..239 CDD:275380 5/22 (23%)
leucine-rich repeat 240..299 CDD:275380 20/72 (28%)
leucine-rich repeat 300..321 CDD:275380 7/22 (32%)
leucine-rich repeat 322..345 CDD:275380 7/22 (32%)
leucine-rich repeat 346..365 CDD:275380 5/19 (26%)
leucine-rich repeat 370..394 CDD:275380 11/34 (32%)
leucine-rich repeat 395..420 CDD:275380 6/24 (25%)
lron-15NP_495322.3 PLN00113 120..>648 CDD:215061 5/37 (14%)
leucine-rich repeat 120..144 CDD:275380
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..194 CDD:275380
leucine-rich repeat 195..217 CDD:275380
leucine-rich repeat 218..239 CDD:275380
leucine-rich repeat 240..263 CDD:275380
leucine-rich repeat 264..311 CDD:275380
leucine-rich repeat 312..335 CDD:275380
leucine-rich repeat 336..356 CDD:275380
leucine-rich repeat 361..383 CDD:275380
leucine-rich repeat 384..405 CDD:275380
leucine-rich repeat 409..432 CDD:275380
LRR 415..840 CDD:443914 57/233 (24%)
leucine-rich repeat 433..462 CDD:275380
leucine-rich repeat 463..487 CDD:275380
leucine-rich repeat 488..511 CDD:275380
leucine-rich repeat 512..533 CDD:275380
leucine-rich repeat 534..557 CDD:275380
leucine-rich repeat 558..581 CDD:275380
leucine-rich repeat 584..607 CDD:275380
leucine-rich repeat 608..631 CDD:275380 3/10 (30%)
leucine-rich repeat 632..655 CDD:275380 3/33 (9%)
leucine-rich repeat 656..676 CDD:275380 7/19 (37%)
leucine-rich repeat 680..703 CDD:275380 6/23 (26%)
leucine-rich repeat 704..749 CDD:275380 12/46 (26%)
leucine-rich repeat 726..739 CDD:275378 3/12 (25%)
leucine-rich repeat 750..771 CDD:275380 3/20 (15%)
leucine-rich repeat 774..797 CDD:275380 5/22 (23%)
LRR <791..1089 CDD:443914 79/311 (25%)
leucine-rich repeat 798..845 CDD:275380 13/46 (28%)
leucine-rich repeat 846..869 CDD:275380 5/22 (23%)
leucine-rich repeat 870..893 CDD:275380 8/24 (33%)
leucine-rich repeat 894..915 CDD:275380 6/20 (30%)
leucine-rich repeat 940..963 CDD:275380 3/22 (14%)
leucine-rich repeat 964..987 CDD:275380 9/23 (39%)
leucine-rich repeat 988..1009 CDD:275380 6/25 (24%)
leucine-rich repeat 1038..1064 CDD:275380 6/26 (23%)
leucine-rich repeat 1113..1139 CDD:275380 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

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