Sequence 1: | NP_001261934.1 | Gene: | CG4950 / 39783 | FlyBaseID: | FBgn0036587 | Length: | 574 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245211.1 | Gene: | LINGO2 / 158038 | HGNCID: | 21207 | Length: | 606 | Species: | Homo sapiens |
Alignment Length: | 598 | Identity: | 130/598 - (21%) |
---|---|---|---|
Similarity: | 239/598 - (39%) | Gaps: | 147/598 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LEVIVILILAISSCDGSGGDIPLRCDEYDSMGYMDVNEAFCTVTGFTVT-HSQNVVIKNIPPGNM 71
Fly 72 V--KFMKFYESTLLYMPFHLFETFPYLKTLDVSNTNILELTRNAFSAASNLTYLNLAYNNLTSIQ 134
Fly 135 TSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTISQIYLTGNLLKELHNDIFKDNEYLEKVSFEG 199
Fly 200 NLLTSIQPEVFRNMR-----RIKEVNLSNNRLIFIHPDTFADAASLENLVLSYNELKNFQLTEKN 259
Fly 260 IVHQLHLDNNYLTNLTINATRFVRASHNQISELFLHQSLHIETLDLSANKLSSISNITNITHMLY 324
Fly 325 LDVSDNPIGPLNISTFSQLKRLRGLNLRGTGIRELKFGMFSKQKYLEELDLSFNNLTILNLDMFV 389
Fly 390 PYLTNLKKFLIDGNGLTELQGNRTFSEAFPQ-LQKLGVSRNRF--NCSYLHHLLIPPSL------ 445
Fly 446 PESVVLNIEPDTNLDETPHIRDVSCISQSQEVVNASFTAEESKL-ESQIQMLSKQLDIVGSHSKN 509
Fly 510 LELHLAF----MQIFAYVM-----------GGLVLVGVVSLITLRYLKNQRSGRYDRSSIVFRSN 559
Fly 560 A----TMEANLTL 568 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4950 | NP_001261934.1 | leucine-rich repeat | 96..119 | CDD:275380 | 6/22 (27%) |
LRR_8 | 118..178 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 120..143 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 144..167 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 168..191 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 192..250 | CDD:290566 | 15/62 (24%) | ||
leucine-rich repeat | 192..215 | CDD:275380 | 7/27 (26%) | ||
LRR_RI | <207..432 | CDD:238064 | 43/232 (19%) | ||
leucine-rich repeat | 216..239 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 240..299 | CDD:275380 | 11/58 (19%) | ||
LRR_8 | 299..356 | CDD:290566 | 12/56 (21%) | ||
leucine-rich repeat | 300..321 | CDD:275380 | 0/20 (0%) | ||
leucine-rich repeat | 322..345 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 344..405 | CDD:290566 | 13/60 (22%) | ||
leucine-rich repeat | 346..365 | CDD:275380 | 4/18 (22%) | ||
leucine-rich repeat | 370..394 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 395..420 | CDD:275380 | 0/24 (0%) | ||
LINGO2 | NP_001245211.1 | LRRNT | 27..60 | CDD:214470 | 9/48 (19%) |
leucine-rich repeat | 39..57 | CDD:275380 | 5/19 (26%) | ||
LRR 1 | 58..79 | 3/20 (15%) | |||
leucine-rich repeat | 59..82 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 60..117 | CDD:316378 | 15/56 (27%) | ||
LRR 2 | 82..103 | 6/20 (30%) | |||
leucine-rich repeat | 83..106 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 106..165 | CDD:316378 | 20/58 (34%) | ||
LRR 3 | 106..127 | 8/20 (40%) | |||
leucine-rich repeat | 107..130 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 130..151 | 8/20 (40%) | |||
leucine-rich repeat | 131..154 | CDD:275380 | 9/22 (41%) | ||
LRR_5 | 146..276 | CDD:331043 | 29/168 (17%) | ||
LRR 5 | 154..175 | 3/20 (15%) | |||
leucine-rich repeat | 155..178 | CDD:275380 | 3/22 (14%) | ||
LRR 6 | 178..199 | 6/20 (30%) | |||
leucine-rich repeat | 179..202 | CDD:275380 | 6/22 (27%) | ||
LRR 7 | 202..223 | 5/25 (20%) | |||
leucine-rich repeat | 203..250 | CDD:275380 | 10/53 (19%) | ||
LRR 8 | 226..247 | 5/22 (23%) | |||
LRR_8 | 250..309 | CDD:316378 | 17/90 (19%) | ||
LRR 9 | 250..271 | 4/20 (20%) | |||
leucine-rich repeat | 251..274 | CDD:275380 | 5/54 (9%) | ||
LRR 10 | 274..295 | 6/20 (30%) | |||
leucine-rich repeat | 275..298 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 298..357 | CDD:316378 | 17/86 (20%) | ||
LRR 11 | 298..319 | 6/20 (30%) | |||
leucine-rich repeat | 299..322 | CDD:275380 | 5/22 (23%) | ||
LRR 12 | 322..343 | 7/48 (15%) | |||
leucine-rich repeat | 323..343 | CDD:275380 | 7/47 (15%) | ||
PCC | 327..>391 | CDD:188093 | 20/102 (20%) | ||
I-set | 410..500 | CDD:254352 | 20/100 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |