DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4950 and LOC1269752

DIOPT Version :10

Sequence 1:NP_648855.2 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_308401.3 Gene:LOC1269752 / 1269752 VectorBaseID:AGAMI1_008327 Length:406 Species:Anopheles gambiae


Alignment Length:371 Identity:84/371 - (22%)
Similarity:150/371 - (40%) Gaps:82/371 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 GANVLMRLDLSYN------EISSLSVNAFCGLHTISQI-YLTGNLLKELHND-IFK---DNEYLE 193
            ||.:...:|:..|      .|..|.|::......:.:| .||..:....:.| :|:   ||...|
Mosquito     6 GARIRKTIDIEQNRYYLALSIEKLIVSSSASGPFLQRIATLTEQISYMAYKDPVFQVPADNTLTE 70

  Fly   194 KVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDTFADAASLENLVLSYNELKNFQLTEK 258
            .....|.:|.|:.....|::.|:...|...:|:    |.|.::...||.|:     :|...||  
Mosquito    71 IEIVNGVMLRSLVAGTNRHLTRLYVENCLLDRI----PPTLSNMIELEGLL-----IKQCALT-- 124

  Fly   259 NIVHQLHLDNNYLTNLTINATRFVRASHNQISELFLHQSLHIETLDLSANKLSSISNITN----- 318
                .|.||      :.:|..:                   :..:||:.|::..:..||.     
Mosquito   125 ----ALRLD------VLVNNPK-------------------LTAIDLTRNRIRQLFPITTPPKTK 160

  Fly   319 --ITHMLYLDVSDNPIGPLNISTFSQLKRLRGLNLRGTGIRELKFGMFSKQKY--LEELDLSFNN 379
              :|   :|.:::|.:..|::|.|:.:..|...|:.|.  |.::|...|...|  |..|.:|.||
Mosquito   161 LPVT---FLSLAENQLDRLDMSMFAFMPDLERFNVEGN--RIVRFEATSPVTYGSLIRLLVSSNN 220

  Fly   380 LTILNLDMFVPYLTNLKKFLIDGNGLTELQGNRTFSEAFPQLQKLGVSRN---RFNCSYLHHL-- 439
            :|  ..|......:.|:...|:.|.||||.  |.:.: .|.|..:|..||   |.:.|:....  
Mosquito   221 IT--QFDTRNLTFSELRSLYINDNALTELP--RHWGK-LPNLIYIGFDRNNLKRIDMSFFAKFPT 280

  Fly   440 LIPPSLPESVVLNIEPDT--NLDETPHIRDVSCISQSQEVVNASFT 483
            ||..::.|:.|.:|...|  .:.|..::     :....::|:.:||
Mosquito   281 LISITISENNVESIRTSTPITMPELEYL-----MFNGNQIVSVNFT 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_648855.2 LRR 96..411 CDD:443914 66/290 (23%)
leucine-rich repeat 96..119 CDD:275380
leucine-rich repeat 120..143 CDD:275380 2/2 (100%)
leucine-rich repeat 144..167 CDD:275380 5/28 (18%)
leucine-rich repeat 168..191 CDD:275380 7/27 (26%)
leucine-rich repeat 192..215 CDD:275380 5/22 (23%)
leucine-rich repeat 216..239 CDD:275380 4/22 (18%)
leucine-rich repeat 240..299 CDD:275380 10/58 (17%)
leucine-rich repeat 300..321 CDD:275380 5/27 (19%)
leucine-rich repeat 322..345 CDD:275380 5/22 (23%)
leucine-rich repeat 346..365 CDD:275380 5/18 (28%)
leucine-rich repeat 370..394 CDD:275380 7/23 (30%)
leucine-rich repeat 395..420 CDD:275380 8/24 (33%)
LOC1269752XP_308401.3 None
Blue background indicates that the domain is not in the aligned region.

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