DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4950 and LRG1

DIOPT Version :9

Sequence 1:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_443204.1 Gene:LRG1 / 116844 HGNCID:29480 Length:347 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380
LRR_8 118..178 CDD:290566
leucine-rich repeat 120..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380
leucine-rich repeat 168..191 CDD:275380
LRR_8 192..250 CDD:290566
leucine-rich repeat 192..215 CDD:275380
LRR_RI <207..432 CDD:238064
leucine-rich repeat 216..239 CDD:275380
leucine-rich repeat 240..299 CDD:275380
LRR_8 299..356 CDD:290566
leucine-rich repeat 300..321 CDD:275380
leucine-rich repeat 322..345 CDD:275380
LRR_8 344..405 CDD:290566
leucine-rich repeat 346..365 CDD:275380
leucine-rich repeat 370..394 CDD:275380
leucine-rich repeat 395..420 CDD:275380
LRG1NP_443204.1 LRR_8 79..128 CDD:290566
LRR_RI <82..248 CDD:238064
LRR 1 93..114
leucine-rich repeat 94..117 CDD:275380
LRR_8 116..176 CDD:290566
LRR 2 117..138
leucine-rich repeat 118..141 CDD:275380
LRR 3 141..162
leucine-rich repeat 142..165 CDD:275380
LRR 4 165..186
leucine-rich repeat 166..189 CDD:275380
LRR_8 169..224 CDD:290566
LRR 5 189..210
leucine-rich repeat 190..213 CDD:275380
LRR_8 213..272 CDD:290566
LRR 6 213..234
leucine-rich repeat 214..237 CDD:275380
LRR 7 237..258
leucine-rich repeat 238..261 CDD:275380
LRR 8 261..282
leucine-rich repeat 262..285 CDD:275380
LRRCT 299..346 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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