DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4950 and igfals

DIOPT Version :9

Sequence 1:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_002940278.2 Gene:igfals / 100489984 XenbaseID:XB-GENE-1008441 Length:601 Species:Xenopus tropicalis


Alignment Length:472 Identity:121/472 - (25%)
Similarity:215/472 - (45%) Gaps:78/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TVTHSQNVVIKNIPPGNMVK-------------FMKFYESTLLYMPFHLFETFPYLKTLDVSNTN 105
            |.||:||:|...:....:.|             ::....:.|:.:|..:|.....|:.|.::...
 Frog   134 TFTHTQNLVSLTLNNNFLTKIEDGLFSGLSNLWYLNLGWNLLVVLPDMVFHDLLNLRELVLAGNR 198

  Fly   106 ILELTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTISQ 170
            ::.|..:.|.:...|..|:|:.|:|..|:.:||.......:|.|::|.||:::..||.|:..:..
 Frog   199 LVYLQPSLFLSLGELKELDLSGNSLKGIKANVFTRQQKTHKLYLNHNHISTVAPRAFSGMKNLRW 263

  Fly   171 IYLTGNLLKELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNRLIFIHPDTFA 235
            :.|:.|.|..|:.|.|.....|..:....|.|||::|.:|::::.:.|:||..|::..:...||.
 Frog   264 LDLSHNRLTALYEDTFFGLPSLNVLRLSNNSLTSLRPRIFKDLQFLVELNLGQNKIKILLERTFE 328

  Fly   236 DAASLENLVLSYNELKNFQ----LTEKNIVHQLHLDNNYLTNLTINATRFVRASHNQISELFLHQ 296
            ..|.||.|.|::|.::..:    |...|:. .::|..|.|.:|..:..:.:...|          
 Frog   329 GLAQLELLSLNHNNVQEIRPGSFLGLLNVA-VINLSGNCLKSLAEHCFKGLGKLH---------- 382

  Fly   297 SLHIETLDLSANK------LSSISNI---------------TNITHMLYLDVSDNPIGPLNISTF 340
            |||:|:..||..|      ||||..:               |::..:|.||:..|.:..|...:|
 Frog   383 SLHMESSCLSHIKPQMFAGLSSIRRLFLQNNEIVAIEDHSFTDLHGLLELDLRSNKLTHLTTRSF 447

  Fly   341 SQLKRLRGLNLRGTGIRELKFGMFSKQKYLEELDLSFNNLTILNLDMFVPYLTNLKKFLIDGNGL 405
            :.||.|..|.|....|..:...:||..:.|:.||||.|.|..|..|:|:| |::|:...:..|.|
 Frog   448 TGLKNLSYLLLSSNQILTISPEVFSPVQQLQWLDLSDNQLKALTEDIFLP-LSSLRYLSLKNNCL 511

  Fly   406 TELQGNRTFSEAF----PQLQKLGVSRNRFNCS---------YLHHLLIPPSLPESVVLNIEPDT 457
                  :|.|..|    |.:|:|.::.|:::|.         .|.:..|.|.|.:|:       :
 Frog   512 ------KTISVNFLIPPPTMQQLWLNGNQWDCGCALKGLRDLALRNSTIVPHLVQSI-------S 563

  Fly   458 NLDET--PHIRDVSCIS 472
            ..|:|  |...:::|.|
 Frog   564 EGDDTASPVYNNITCAS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380 4/22 (18%)
LRR_8 118..178 CDD:290566 18/59 (31%)
leucine-rich repeat 120..143 CDD:275380 8/22 (36%)
leucine-rich repeat 144..167 CDD:275380 8/22 (36%)
leucine-rich repeat 168..191 CDD:275380 6/22 (27%)
LRR_8 192..250 CDD:290566 19/57 (33%)
leucine-rich repeat 192..215 CDD:275380 7/22 (32%)
LRR_RI <207..432 CDD:238064 69/253 (27%)
leucine-rich repeat 216..239 CDD:275380 6/22 (27%)
leucine-rich repeat 240..299 CDD:275380 13/62 (21%)
LRR_8 299..356 CDD:290566 21/77 (27%)
leucine-rich repeat 300..321 CDD:275380 9/41 (22%)
leucine-rich repeat 322..345 CDD:275380 7/22 (32%)
LRR_8 344..405 CDD:290566 21/60 (35%)
leucine-rich repeat 346..365 CDD:275380 4/18 (22%)
leucine-rich repeat 370..394 CDD:275380 12/23 (52%)
leucine-rich repeat 395..420 CDD:275380 6/28 (21%)
igfalsXP_002940278.2 leucine-rich repeat 69..92 CDD:275380
PLN00113 71..>534 CDD:215061 109/417 (26%)
leucine-rich repeat 93..116 CDD:275380
leucine-rich repeat 117..140 CDD:275380 3/5 (60%)
leucine-rich repeat 141..164 CDD:275380 2/22 (9%)
leucine-rich repeat 165..188 CDD:275380 3/22 (14%)
leucine-rich repeat 189..212 CDD:275380 4/22 (18%)
leucine-rich repeat 213..236 CDD:275380 8/22 (36%)
leucine-rich repeat 237..260 CDD:275380 8/22 (36%)
leucine-rich repeat 261..284 CDD:275380 6/22 (27%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..332 CDD:275380 6/22 (27%)
leucine-rich repeat 333..354 CDD:275380 6/20 (30%)
leucine-rich repeat 357..380 CDD:275380 4/23 (17%)
leucine-rich repeat 381..404 CDD:275380 9/32 (28%)
leucine-rich repeat 405..428 CDD:275380 2/22 (9%)
leucine-rich repeat 429..450 CDD:275380 6/20 (30%)
leucine-rich repeat 453..472 CDD:275380 4/18 (22%)
leucine-rich repeat 477..500 CDD:275380 12/23 (52%)
leucine-rich repeat 525..537 CDD:275378 3/11 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.