DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)72Dr and ggh

DIOPT Version :9

Sequence 1:NP_730120.1 Gene:l(3)72Dr / 39778 FlyBaseID:FBgn0263608 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_998487.1 Gene:ggh / 406624 ZFINID:ZDB-GENE-040426-2615 Length:312 Species:Danio rerio


Alignment Length:336 Identity:103/336 - (30%)
Similarity:169/336 - (50%) Gaps:50/336 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AESAYTDAPYL--NRVPTVGVMCIDIATQLQQNFSGAYHSYLAASYVKFLEASGAHVVPIWIGRE 64
            |.|.|...|.:  |..|.:||:..|:.......     :||:|||||||||::||.|||:.|.:.
Zfish    15 AVSIYNFGPLIKTNERPIIGVLAQDVFDPKPDR-----NSYIAASYVKFLESAGARVVPVMINKS 74

  Fly    65 RAYYALMMSQLNGILLPGGAVFIDEADRQANPDVTSDCVRSAELIYQLAMERNMRAKKLDDRGAY 129
            ...|:.:...:||:|.|||.|.::          :|...::|.:.|:||:|.|       ..|.|
Zfish    75 EDEYSRLFKSINGVLFPGGGVSLE----------SSGYSKAAGIFYRLALEAN-------SNGDY 122

  Fly   130 FPVWGTCLGFQL--------ILIHAAEAPNVRIACQPMREAMPVTLTDDYQQSQLLGSLPKSVAD 186
            ||||||||||:|        :|:.......:         |:|:..|:|.:.|:|....|:.:..
Zfish   123 FPVWGTCLGFELLTLLTSGELLLSHTNTSGI---------ALPLDFTEDVKGSRLFKEFPEELMK 178

  Fly   187 EMEKHPFACHQHRYCITKESL-ESYGLAKDWHPLATQKDTSGLEFITIVEHRRFPIFGCQFHPER 250
            .:...|...:.|::.||.|:. .:..|.|.:..|:|..|... :|::.:|...|||:..|:|||:
Zfish   179 SLATEPLTENSHQWSITTENFTANKKLKKFYRVLSTNTDGYN-KFVSTMEAYDFPIYATQWHPEK 242

  Fly   251 AAFEQLFNSPDKCYMAHSRMGIDLSQIFGSRFVDFCRRNNNQFESDKLKTRHLIWNWQPVFSGKF 315
            .|||  :..|   |:.|:...|..:....:.||:..|:|.:.|.|.:.:.:.||:|::|.::|  
Zfish   243 NAFE--WTRP---YIPHTPSAIKTTFYMANFFVNEARKNLHSFASTEEEEKALIYNYKPEYTG-- 300

  Fly   316 KGSNWQQCYLF 326
            ..|.::|.|.|
Zfish   301 IQSAFEQTYFF 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72DrNP_730120.1 GATase1_Glutamyl_Hydrolase 23..313 CDD:153218 90/298 (30%)
gghNP_998487.1 GATase1_Glutamyl_Hydrolase 33..300 CDD:153218 92/303 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590433
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1559
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54943
OrthoDB 1 1.010 - - D539287at33208
OrthoFinder 1 1.000 - - FOG0002965
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11315
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5199
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.850

Return to query results.
Submit another query.