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Protein Alignment MED10 and BUD27
DIOPT Version :9
Sequence 1: | NP_001261931.1 |
Gene: | MED10 / 39777 |
FlyBaseID: | FBgn0036581 |
Length: | 133 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_683715.1 |
Gene: | BUD27 / 850521 |
SGDID: | S000001871 |
Length: | 796 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 169 |
Identity: | 31/169 - (18%) |
Similarity: | 56/169 - (33%) |
Gaps: | 72/169 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 IRIIVSDFQPQGQNVLNQKINSLVTGL-----------------------QEIDKLRSQVQDVYV 63
:||...|:...|.| |:..:.:...|| ::::.||.:::|..:
Yeast 632 VRITNVDYHALGGN-LDDMVKAYSLGLYDDDLEEDPGTIVEKLEDFKEYNKQVELLRDEIRDFQL 695
Fly 64 PFE-VFFDYIDQDKN----------PQLYTKDCVEKAL---AKNEEV------------------ 96
..: |..:..:.|.| |:.||.|..|.|| ...|||
Yeast 696 ENKPVTMEEEENDGNVMNDIIEHEFPESYTNDEDEVALHPGRLQEEVAIEYRRLKEATASKWQSS 760
Fly 97 ------KGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYR 129
:|::|.:.||.. |.:.:.:|:.|
Yeast 761 SPAAHTEGELEPIDKFGN----------PVKTSRFRSQR 789
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED10 | NP_001261931.1 |
Med10 |
9..127 |
CDD:401627 |
29/165 (18%) |
BUD27 | NP_683715.1 |
Prefoldin |
8..121 |
CDD:397237 |
|
DUF3835 |
714..788 |
CDD:403972 |
16/83 (19%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13345 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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