DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDCD-5 and Pdcd5

DIOPT Version :9

Sequence 1:NP_648848.1 Gene:PDCD-5 / 39776 FlyBaseID:FBgn0036580 Length:133 Species:Drosophila melanogaster
Sequence 2:XP_036009163.1 Gene:Pdcd5 / 56330 MGIID:1913538 Length:144 Species:Mus musculus


Alignment Length:28 Identity:18/28 - (64%)
Similarity:23/28 - (82%) Gaps:0/28 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AQQEQMRAQEEMKHSILSQVLDQQARAR 59
            ||||..:.:.||::|||:|||||.||||
Mouse   107 AQQEAKQREAEMRNSILAQVLDQSARAR 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD-5NP_648848.1 dsDNA_bind 9..104 CDD:280208 18/28 (64%)
Pdcd5XP_036009163.1 dsDNA_bind 100..>142 CDD:412652 18/28 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840822
Domainoid 1 1.000 95 1.000 Domainoid score I7430
eggNOG 1 0.900 - - E1_COG2118
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10506
Inparanoid 1 1.050 114 1.000 Inparanoid score I4832
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53907
OrthoDB 1 1.010 - - D1645187at2759
OrthoFinder 1 1.000 - - FOG0004369
OrthoInspector 1 1.000 - - oto94207
orthoMCL 1 0.900 - - OOG6_101501
Panther 1 1.100 - - LDO PTHR10840
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1824
SonicParanoid 1 1.000 - - X4748
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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