DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDCD-5 and Pdcd5l1

DIOPT Version :10

Sequence 1:NP_648848.1 Gene:PDCD-5 / 39776 FlyBaseID:FBgn0036580 Length:133 Species:Drosophila melanogaster
Sequence 2:NP_001119762.1 Gene:Pdcd5l1 / 366089 RGDID:1564319 Length:126 Species:Rattus norvegicus


Alignment Length:129 Identity:53/129 - (41%)
Similarity:87/129 - (67%) Gaps:6/129 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DSDLDALRAQRMSQMQSQFGGGNDAEKQQAQQEQMRAQEEMKHSILSQVLDQQARARLNTLKVSK 67
            :.:|:|||.||::::.::.|..:|..:.||:|.    :.|:::|||:|||||.|||||..|...|
  Rat     4 EEELEALRRQRLAELHAKHGDPDDPAQHQAKQR----EAEVRNSILAQVLDQSARARLTNLAFVK 64

  Fly    68 PEKAQMFENMVIRMAQMGQVRGKLDDAQFVSILESVNAQMPQSKSSVKYDRRRAAIDSDDDEDY 131
            |||.:..||.:|:|||.|.:.|.:.:...:.|||.| :|..:.|::|.::||: .:|||:|:||
  Rat    65 PEKMKAVENYLIQMAQYGLLSGMVSEPGLIEILEKV-SQQTEKKTTVTFNRRK-VMDSDEDDDY 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD-5NP_648848.1 dsDNA_bind 9..117 CDD:460404 43/107 (40%)
Pdcd5l1NP_001119762.1 dsDNA_bind 10..113 CDD:460404 43/107 (40%)

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