DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and PDI1

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_009887.1 Gene:PDI1 / 850314 SGDID:S000000548 Length:522 Species:Saccharomyces cerevisiae


Alignment Length:424 Identity:88/424 - (20%)
Similarity:176/424 - (41%) Gaps:80/424 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKVLEL-SDRFID-VRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALHATNVRVGRLDCTKYPAA 88
            |.|::| :|.|.: ::.....|..|:|||||:||...|.:...|:.|...|:.:.::|||:....
Yeast    32 SAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDL 96

  Fly    89 AKEFKVRGYPTIMFIKG---NMEFTYNGDRGRDELVDYALRMSGPPVQLVTRTESVDMLKGSHTI 150
            ..|..:.|:|::...|.   |....|.|.|..:.:|.:.::.|.|.|.:|....:....:...|.
Yeast    97 CMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVADLPAYLANETFVTP 161

  Fly   151 FFIFVGQQEGVVWDTYYAAA-EGYQEHGFFYATSEDIAAQHFDFE---KLPAV----IVYKEEQH 207
            ..:..|:.:.....|:|:.| :.:.::.|..|.:.|     .||:   .||:.    :||     
Yeast   162 VIVQSGKIDADFNATFYSMANKHFNDYDFVSAENAD-----DDFKLSIYLPSAMDEPVVY----- 216

  Fly   208 HFYPHGHLAHEMDPNEVNETVFQ-WVNVERFTLFPKVTRFNIHQLLKTNKYL-VLAVVQEDKLNQ 270
                :|..|...|.:     ||: |:.||....|.::......|.:::...| .|....|::|. 
Yeast   217 ----NGKKADIADAD-----VFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEELE- 271

  Fly   271 IATHELEFRDMVEGVIRKHRARYH----DKFQFGWIGEPSIAHSIIL---DQLPTPHLIAINSST 328
                  |::.:...:.:|:|...:    |..:||       .|:..|   :|.|   |.||:..|
Yeast   272 ------EYKPLFTELAKKNRGLMNFVSIDARKFG-------RHAGNLNMKEQFP---LFAIHDMT 320

  Fly   329 Q--HHFIPE---------DDPMQMTPQALH-LFLESIRNESAIAYGGDTYFVRLNRALFEVRRAL 381
            :  .:.:|:         .|.:.:..:|:. |..:.::.:::........|...:.::|::....
Yeast   321 EDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKN 385

  Fly   382 RDMWLGNPVLTTVIFGLPLGFLSLIMYSIFCGDC 415
            .|..:.:|....::          :.|:.:||.|
Yeast   386 HDEIVNDPKKDVLV----------LYYAPWCGHC 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 29/105 (28%)
ER_PDI_fam 28..>355 CDD:273457 79/360 (22%)
PDI1NP_009887.1 ER_PDI_fam 32..492 CDD:273457 88/424 (21%)

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