DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and PDIL2-2

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_171990.3 Gene:PDIL2-2 / 839355 AraportID:AT1G04980 Length:447 Species:Arabidopsis thaliana


Alignment Length:222 Identity:59/222 - (26%)
Similarity:93/222 - (41%) Gaps:49/222 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKVLEL-SDRFIDVRHEGQ--WLVMFYAPWCGYCKKTEPIFALVAQALHATNVRVGRLDCTKYPA 87
            |..:|| |..|.::..|.:  |:|.|:|||||:|||..|.:...|..|.. .|::|.::|....:
plant   167 SASVELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVNCDAEQS 230

  Fly    88 AAKEFKVRGYPTIMFIKGNME--FTYNGDRGRDELVDYALRM----SGPPVQLVTRTESVDMLK- 145
            ....|||:|:|||:....:..  ..|.|.|....:..:||..    :||..  ||.....|::: 
plant   231 IKSRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESFALEQLESNAGPAE--VTELTGPDVMED 293

  Fly   146 --GSHTIFFIFVGQQEGVVWDTYYAAAEG---YQE-------------HGFFYATSEDIAAQHFD 192
              ||..|.|:      ..:.|...:.|||   |.|             :||.:..    |.:..|
plant   294 KCGSAAICFV------SFLPDILDSKAEGRNKYLEMLLSVADKFKKDPYGFVWVA----AGKQPD 348

  Fly   193 FEK--------LPAVIVYKEEQHHFYP 211
            .||        .||::....::..:.|
plant   349 LEKRVGVGGYGYPAMVALNAKKGAYAP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 34/109 (31%)
ER_PDI_fam 28..>355 CDD:273457 58/220 (26%)
PDIL2-2NP_171990.3 PDI_a_P5 33..134 CDD:239299
PDI_a_P5 168..270 CDD:239299 32/102 (31%)
P5_C 279..408 CDD:239281 23/109 (21%)
Blue background indicates that the domain is not in the aligned region.

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