DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and PDIL5-1

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_172274.1 Gene:PDIL5-1 / 837311 AraportID:AT1G07960 Length:146 Species:Arabidopsis thaliana


Alignment Length:112 Identity:32/112 - (28%)
Similarity:50/112 - (44%) Gaps:11/112 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LISALLLTLGSTGLSSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALHATN- 74
            |:.|.::||.....|.|:.|         .:..|.|.|..|||.:|||...::..:.:|:...: 
plant    22 LVKAEVITLTPETFSDKIKE---------KDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77

  Fly    75 VRVGRLDCTKYPAAAKEFKVRGYPTIM-FIKGNMEFTYNGDRGRDEL 120
            :.||.:||....|...:.::..|||.| |..|.....|.|.|..:.|
plant    78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESL 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 27/96 (28%)
ER_PDI_fam 28..>355 CDD:273457 26/95 (27%)
PDIL5-1NP_172274.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 27..128 CDD:469754 30/107 (28%)

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