DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and PDIL1-6

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_188232.2 Gene:PDIL1-6 / 820856 AraportID:AT3G16110 Length:534 Species:Arabidopsis thaliana


Alignment Length:356 Identity:83/356 - (23%)
Similarity:152/356 - (42%) Gaps:50/356 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VLEL----SDRFIDVRHEGQWLVMF--YAPWCGYCKKTEPIFALVAQALH--ATNVRVGRLDCTK 84
            |:||    :.|.||    |...||.  |||||....:..|.||..|..|.  .::|.:.::|..:
plant    77 VVELNGDNTKRLID----GNEYVMVLGYAPWCARSAELMPRFAEAATDLKEIGSSVLMAKIDGER 137

  Fly    85 YPAAAKEFKVRGYPT-IMFIKGNMEFTYNGDRGRDELVDYALRMSG-PPVQLVTRTESVDMLKGS 147
            |...|.:.:::|:|| ::|:.|..: :|.|....:|:|.:..:.:| ..::|.|..|:...||..
plant   138 YSKVASQLEIKGFPTLLLFVNGTSQ-SYTGGFSSEEIVIWVQKKTGASTIKLDTVDEASGFLKKH 201

  Fly   148 HT-IFFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHFDFEKLPAVIV--YKEEQHHF 209
            || |..:|...::....|.:..||....|..|...:|.|:|...|...|...|.|  .|.|...:
plant   202 HTFILGLFEKSEDSSGHDEFVKAASLDNEIQFVETSSIDVAKLLFPNLKTNNVFVGLVKTEAEKY 266

  Fly   210 YPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQLLKTN-KYLVLAVVQEDKLNQIAT 273
            ..:.      .|.:. |.:.:::|..:|.|..|:|..|..::..:. |..|:...:.|....:| 
plant   267 TSYD------GPCQA-EKIVEFLNSNKFPLVTKLTESNTVRVYSSPVKLQVMVFSKTDDFESLA- 323

  Fly   274 HELEFRDMVEGVIRKHRAR----YHDKFQFGWIGEPSIAHSII----LDQLPTPHLIAINSSTQH 330
                  ..:|.:.||.:::    |.|      |...::|...:    ::......:.|.:::...
plant   324 ------QPLEDIARKFKSKLMLIYID------ISNENLAMPFLTLFGIEDAKKTVVAAFDNNLNS 376

  Fly   331 HFIPEDDPMQMTPQALHLFLESIRNESAIAY 361
            .::.|.||   :|..:..|...:.:.:..||
plant   377 KYLLESDP---SPSNIEEFCFGLAHGTVSAY 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 32/108 (30%)
ER_PDI_fam 28..>355 CDD:273457 81/348 (23%)
PDIL1-6NP_188232.2 ER_PDI_fam 77..522 CDD:273457 83/356 (23%)

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