DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and Tmx1

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_082615.1 Gene:Tmx1 / 72736 MGIID:1919986 Length:278 Species:Mus musculus


Alignment Length:237 Identity:48/237 - (20%)
Similarity:87/237 - (36%) Gaps:85/237 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PKPKQHLETNNTSFLSLRLFFL-----YLSLGVLVAAHSKLFALG----------------KLVS 151
            |.....|.:|..|..::...:|     |:..||::...|:|..||                ::.|
Mouse   294 PTTNTTLTSNTQSQTTVTPSYLLQCVRYMRGGVVLLLFSRLCFLGGSSLLMIIKPVSKMPTQIAS 358

  Fly   152 NYGIFSLISTT----------------------QLIFTAVLTAIINRFKF-----------TRWI 183
            ...:.|.|.||                      .||.||::|::::....           |.||
Mouse   359 IIELISKIITTILVLIKAVHYDCENAGLQFVFAALIVTAMITSLMHTITVFLHRGLSHELKTCWI 423

  Fly   184 -------IISILLTIVIYVLGTPDFGGQPHDGEEFGYNIQAWLAFSATIAFSLSLCLIQLG---F 238
                   :::.|:|.:....|...|.|:             |:....|:..:|.. ::.||   |
Mouse   424 GSLIIVDLLNTLITSISIFYGLWWFQGR-------------WMLIVMTVYVTLEF-ILYLGAAVF 474

  Fly   239 EKLQVKTKRY----GNEKVFR--MVLEMQICVAFVASVVCLV 274
            :::: |.|:|    ..::|.:  .|||.:....|:..|:|||
Mouse   475 KRME-KYKKYFIKRSTKRVEQNCTVLENKKPPWFLMFVICLV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 4/19 (21%)
ER_PDI_fam 28..>355 CDD:273457 48/237 (20%)
Tmx1NP_082615.1 PDI_a_TMX 30..129 CDD:239292
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..278
Blue background indicates that the domain is not in the aligned region.

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