DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and tmx3a

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001018393.2 Gene:tmx3a / 553578 ZFINID:ZDB-GENE-050522-396 Length:437 Species:Danio rerio


Alignment Length:431 Identity:126/431 - (29%)
Similarity:224/431 - (51%) Gaps:36/431 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LISALLLTLGSTGLSSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALHA--T 73
            |:||:.|      :|..|..|.|:|.:.|....|||.||||||.||...||::..|...|.:  :
Zfish    12 LLSAIAL------VSGYVEGLDDKFTEFRQNELWLVEFYAPWCAYCHTFEPVWTEVGAELKSLGS 70

  Fly    74 NVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDYALRMSGPPVQLVTRT 138
            .|.||::|.|.:.:.|.||.:||||||...||::.|.|.|.|.:|.::::..|:|||.|:.::..
Zfish    71 PVNVGKIDTTAHTSIATEFNIRGYPTIKLFKGDLSFDYKGPRTKDGIIEFTNRVSGPVVRPLSSV 135

  Fly   139 ESVDMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHFDFEKLPAVIVYK 203
            :....:...|.:.|:::| .|.::...||.||..:..|.:|:..||:|..:....:.:|||.|:|
Zfish   136 QLFQHVMSRHDVIFVYIG-GESLLKKEYYKAATEFIVHTYFFTASEEILPKAVTLQDVPAVAVFK 199

  Fly   204 EEQHHFYPHGHLAHEMDPNE-VNETVFQWVNVERFTLFPKVTRFNIHQLLKTNKYLVLAVVQEDK 267
            :..::.|           || ::..:..|:|.|||..:.::..::::|:.:.:|.:.||||.|..
Zfish   200 DGTYYIY-----------NEFIDGDLSSWINRERFLSYFQIDSYSLYQMGELSKLVALAVVDEKN 253

  Fly   268 LNQIATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIAHSIILDQLPTPHLIAINSSTQHHF 332
            .::   ..:.::.::|.|..::|..|...||||::......:.:|:.:|..|.:|.:|.|...::
Zfish   254 PSE---ESIRYKTLMERVSTEYRDHYKSDFQFGYVDGNEYVNGLIMGELAMPSIIVLNMSIDGYY 315

  Fly   333 IPEDDPMQMTPQALHLFLESIRNESAIAYGGDTYFVRLNRALFEVRRALRDMWLGNPVLTTVIFG 397
            |||..  ..|.:.|..||.|:.:.|....||:.::....|..::.:..:..|....||.:..:.|
Zfish   316 IPESS--TETIEDLLQFLNSVLDGSTTLLGGNGFWQCAKRIFYKGKNTVMSMVETAPVFSCFVLG 378

  Fly   398 LPLGFLSLIMYSIFCGDCLVTEEDPDED---------HEKK 429
            ||:|.:.|::|:. |......:|.|:|:         |.||
Zfish   379 LPVGVVVLVIYAT-CTAVPADDEKPEEEATASPALDTHGKK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 42/102 (41%)
ER_PDI_fam 28..>355 CDD:273457 101/329 (31%)
tmx3aNP_001018393.2 PDI_a_TMX3 22..125 CDD:239298 42/102 (41%)
ER_PDI_fam 27..>337 CDD:273457 99/326 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..437 6/21 (29%)
Di-lysine motif. /evidence=ECO:0000255 434..437
Blue background indicates that the domain is not in the aligned region.

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