DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5027 and tmx3b

DIOPT Version :9

Sequence 1:NP_648847.3 Gene:CG5027 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001039026.1 Gene:tmx3b / 553250 ZFINID:ZDB-GENE-060901-5 Length:484 Species:Danio rerio


Alignment Length:419 Identity:140/419 - (33%)
Similarity:234/419 - (55%) Gaps:30/419 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LISALLLTLGSTGLSSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALHATN- 74
            |:|.:||.|        ||:|.|.|.|.|.|..|||.|||||||||||.||::..|...|..:. 
Zfish    12 LLSRVLLAL--------VLDLDDSFKDSRMEDVWLVDFYAPWCGYCKKLEPVWEEVGAELSRSGS 68

  Fly    75 -VRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDYALRMSGPPVQLVTRT 138
             ||||::|.|.|...|.||.|||||||..:||::.:.|.|.|.:|:::::|.|::||.|:.:...
Zfish    69 PVRVGKMDATAYSGMASEFGVRGYPTIKLLKGDLAYNYKGPRTKDDIIEFANRVAGPAVRALPSR 133

  Fly   139 ESVDMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHFDFEKLPAVIVYK 203
            :..:.:...|::.|::|| .|..:.:.|...|.....:.:|::.||::..:.....:||:|:|:|
Zfish   134 QMFEHVLKRHSVLFLYVG-GESPLKEKYIEVASELIVYTYFFSASEEVLTEAVVLPELPSVVVFK 197

  Fly   204 EEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQLLKTNKYLVLAVVQEDKL 268
            :.....|         |..| :.::..|||.|||..:.::..|.:::|.:|.|.:.:||. :|| 
Zfish   198 DASFFTY---------DEYE-DGSLSSWVNRERFQSYLQIDGFTLYELGETGKLVAIAVT-DDK- 250

  Fly   269 NQIATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIAHSIILDQLPTPHLIAINSSTQHHFI 333
             ..:.|....:.:::.|..:||.:::..||||.:......:|:|:.::..|.:|.:|:|.:.:|:
Zfish   251 -DQSDHSSRLKGLIQRVATEHREQFNRDFQFGHMSGNDYINSLIMGEVSIPSIIILNTSNEQYFL 314

  Fly   334 PEDDPMQMTPQALHLFLESIRNESAIAYGGDTYFVRLNRALFEVRRALRDMWLGNPVLTTVIFGL 398
            |. :|::...|.|. |..|:.:.||.|||||..|.|:.|..::.|..:..::..:|:|...:|||
Zfish   315 PA-EPVEDLQQMLQ-FFSSVLDGSAPAYGGDGIFQRIKRVAYDARSTIMSVFRSSPLLGCFLFGL 377

  Fly   399 PLGFLSLIMYSIFCGDCLVTEEDPDEDHE 427
            |||.:||:.|.|    |....:|..||.|
Zfish   378 PLGVISLMCYGI----CTAESDDGTEDLE 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5027NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 51/102 (50%)
ER_PDI_fam 28..>355 CDD:273457 107/328 (33%)
tmx3bNP_001039026.1 PDI_a_TMX3 27..123 CDD:239298 47/95 (49%)
Thioredoxin_6 153..328 CDD:290560 47/189 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591983
Domainoid 1 1.000 84 1.000 Domainoid score I8201
eggNOG 1 0.900 - - E2759_KOG4277
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10381
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330414at33208
OrthoFinder 1 1.000 - - FOG0006149
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.750

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