DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5027 and p4hb

DIOPT Version :9

Sequence 1:NP_648847.3 Gene:CG5027 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001034820.1 Gene:p4hb / 395048 XenbaseID:XB-GENE-494070 Length:506 Species:Xenopus tropicalis


Alignment Length:472 Identity:108/472 - (22%)
Similarity:188/472 - (39%) Gaps:112/472 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFGLISALLLTLGSTGLSSKVLEL-SDRFIDVRHEGQW-LVMFYAPWCGYCKKTEPIFALVAQAL 70
            :|| .|.|::...:......||.| .|.|.:...:..: ||.|||||||:||...|.:...|..|
 Frog     7 LFG-CSLLIVARANIPEERDVLVLKKDNFDEALKQYPFILVEFYAPWCGHCKALAPEYEKAAGVL 70

  Fly    71 HATN--VRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDR--------GRD--ELVDY 123
            .:..  :|:|::|.|:....|:||.|||||||.|.|       |||:        ||:  ::|::
 Frog    71 KSEGLPIRLGKVDATEESDLAQEFGVRGYPTIKFFK-------NGDKASPKEYSAGREAADIVNW 128

  Fly   124 ALRMSGPPVQLVTRTESVDMLKGSHTI----FFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSE 184
            ..:.:||....:.....|..|..|..:    ||.....:...|   :..|||...:.. |..||.
 Frog   129 LKKRTGPAASTLGDEAGVAALVDSSEVAVIGFFKDPASEPAKV---FLQAAEAVDDIP-FGITSS 189

  Fly   185 DIAAQHFDFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIH 249
            :.|...::..| ..::::|:     :..|..|:|.|                      :|:..:.
 Frog   190 EAAFSKYELGK-DGIVLFKK-----FDEGRNAYEGD----------------------ITKEEVL 226

  Fly   250 QLLKTNKY-LVLAVVQEDKL----NQIATHEL--------EFRDMVEGVIRKHRARYHDKFQFGW 301
            ..:|.|:. ||:...::...    .:|.||.|        ::::.:|. .:|..|.:..|..|.:
 Frog   227 SFIKANRLPLVIEFTEQTAPMIFGGEIKTHILFFLPKSASDYKEKLED-FKKAAASFKGKILFIF 290

  Fly   302 IGEPSIAHSIIL-------DQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFLESIRNESAI 359
            |......:..||       ::.|...||.:          |::..:..|::..|..|:|:...  
 Frog   291 IDSDHTDNQRILEFFGLKKEECPAVRLITL----------EEEMTKYKPESADLSAEAIKEFC-- 343

  Fly   360 AYGGDTYFV-RLNRALFEVRRALRDMWLGNPV-------LTTVIFGLPLGFLSLIMYSIFCGDCL 416
                |::.. ::...|  :.:.:.|.|..|||       ...|:|..... :.:..|:.:||.|.
 Frog   344 ----DSFLEGKVKPHL--MSQDVSDDWDKNPVKILVGKNFEEVVFNEEKN-VFVEFYAPWCGHCK 401

  Fly   417 VTEEDPDE------DHE 427
            ......|:      |||
 Frog   402 QLAPIWDQLGEKYKDHE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5027NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 41/114 (36%)
ER_PDI_fam 28..>355 CDD:273457 87/364 (24%)
p4hbNP_001034820.1 ER_PDI_fam 25..474 CDD:273457 104/453 (23%)
pdi_dom 29..133 CDD:273454 39/110 (35%)
PDI_b_family 137..232 CDD:239279 21/126 (17%)
PDI_b'_family 244..347 CDD:239280 21/119 (18%)
PDI_a_PDI_a'_C 368..470 CDD:239293 12/52 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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