DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and pdia3

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001186666.1 Gene:pdia3 / 378851 ZFINID:ZDB-GENE-031002-9 Length:494 Species:Danio rerio


Alignment Length:477 Identity:107/477 - (22%)
Similarity:180/477 - (37%) Gaps:135/477 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLTLGSTGLSSKVLELSDRFIDVR---HEGQWLVMFYAPWCGYCKKTEPIFALVAQALHATNVRV 77
            |:...:...:|.|||.:|...|.|   |: ..||.|:|||||:||:..|.:...|..|... |.:
Zfish     8 LVAFAAAARASDVLEYTDDDFDSRIGDHD-LILVEFFAPWCGHCKRLAPEYEAAATRLKGI-VPL 70

  Fly    78 GRLDCTKYPAAAKEFKVRGYPTI-MFIKGNMEFTYNGDRGRDELVDYALRMSGP-PVQLVTRTES 140
            .::|||.......::.|.||||: :|..|.....|:|.|..|.:|.:..:.:|| .|:|....: 
Zfish    71 AKVDCTANSKVCGKYGVSGYPTLKIFRDGEDSGGYDGPRTADGIVSHLKKQAGPASVELKNEAD- 134

  Fly   141 VDMLKGSHTIFFIFVGQQEGVVWDTYY---AAAEG---------YQEHGFFYATSEDIAAQH-FD 192
                      |..::|.::..|...:.   :||:|         .:.:.|.:..:||:..:| .|
Zfish   135 ----------FEKYIGDRDASVVGFFADGGSAAQGEFLKAASALRESYRFAHTNNEDLLKKHGID 189

  Fly   193 FEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLF--PKVTRFNIHQLLKTN 255
            .|   .:|:::..|        |:::.:.:.|              ||  .|.|...|.:.::.|
Zfish   190 GE---GIILFRSPQ--------LSNKFEDSSV--------------LFTEDKFTSAKIKKFIQDN 229

  Fly   256 KYLVLAVVQEDKLNQ-------IATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIAHSIIL 313
            .:.:.|.:.||..:|       :|.:::::....:|      :.|       |...........|
Zfish   230 IFGICAHMTEDNKDQLKGKDLLVAYYDVDYEKNPKG------SNY-------WRNRVMKVAKGFL 281

  Fly   314 DQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFLESIRNESAIAYGGDTY-----FVRLNRA 373
            ||.........|.:...|.:.|   :.:...:..|.|..||...     ||.|     |.|..:|
Zfish   282 DQGKKLSFAVANKNRFSHDVSE---LGLDGSSGELPLVGIRTAK-----GDKYVMKEEFSRDGKA 338

  Fly   374 LFEVRRALRDMWLGN----------------PVLTTVIFGLPLGFLSLI----------MYSIFC 412
            |   .|.|:|.:.||                ||...|    ...|.|::          .|:.:|
Zfish   339 L---ERFLQDYFDGNLKRYLKSEPVPENNDGPVKVLV----AENFDSIVNDDSKDVLIEFYAPWC 396

  Fly   413 GDCLVTE-----------EDPD 423
            |.|...|           |||:
Zfish   397 GHCKSLEPKYKELGEKLSEDPN 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 36/104 (35%)
ER_PDI_fam 28..>355 CDD:273457 79/353 (22%)
pdia3NP_001186666.1 ER_PDI_fam 18..475 CDD:273457 106/467 (23%)

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