DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and tmx1

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001108605.1 Gene:tmx1 / 323607 ZFINID:ZDB-GENE-030131-2327 Length:284 Species:Danio rerio


Alignment Length:148 Identity:37/148 - (25%)
Similarity:67/148 - (45%) Gaps:24/148 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GQWLVMFYAPWCGYCKKTEPIFALVAQALHATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGN 106
            |:|::.|:||||..|::.||::...|.......|.:.::|.|::|..:..|.:...|||...|..
Zfish    52 GEWMIEFFAPWCPACQQLEPVWTEFAGWGDDLGVNIAKVDVTEHPGLSGRFIIMALPTIYHCKDG 116

  Fly   107 MEFTYNGDRGRDELVDYALRMS-----------GPPVQLVTRTESVDMLKGSHTIFFI-----FV 155
            :...|.|||.:::.:.:.....           ||...|:....::..|.     .||     ::
Zfish   117 VFRRYQGDRSKEDFLSFIEEKKWQSIEPVSSWFGPSSFLMNIMSALFKLS-----VFIRHCHNYL 176

  Fly   156 GQQEGV-VWDTY--YAAA 170
            .:|.|. ||::|  :|.|
Zfish   177 TEQMGFSVWESYGIFACA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 24/85 (28%)
ER_PDI_fam 28..>355 CDD:273457 37/148 (25%)
tmx1NP_001108605.1 PDI_a_TMX 36..136 CDD:239292 24/83 (29%)

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