DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and pdia6

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_922915.2 Gene:pdia6 / 322160 ZFINID:ZDB-GENE-030131-879 Length:440 Species:Danio rerio


Alignment Length:424 Identity:98/424 - (23%)
Similarity:161/424 - (37%) Gaps:94/424 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFGLISALLLTLGSTGL---SSKVLELSDRFID---VRHEGQWLVMFYAPWCGYCKKTEPIFALV 66
            :.|:::..|..|.:.||   |..|:||:....:   ::.:..|||.|||||||:||...|.:...
Zfish     4 LLGVLACSLTVLSAYGLYTSSDDVVELNPSNFNREVIQSDSLWLVEFYAPWCGHCKSLAPEWKKA 68

  Fly    67 AQALHATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNME--FTYNGDRGRDELVDYAL---- 125
            |.||... |:||.:|..::.:...::.|||:|||....||..  ..|.|.|....:||.||    
Zfish    69 ATALKGI-VKVGAVDADQHNSLGGQYGVRGFPTIKIFGGNKHKPEDYQGGRTNQAIVDAALNALR 132

  Fly   126 -----------------RMSG-------PPVQL--------VTRTESVDMLKGSHTIFFIFVGQQ 158
                             |.||       ..|:|        |..::.|.:::    .|..:.|..
Zfish   133 SLVKDRLGGKTGGSDYSRQSGGGAGNKKDVVELTDDNFDRTVLESDDVWLVE----FFAPWCGHC 193

  Fly   159 EGVVWDTYYAAAE-GYQEHGFFYATSEDIA-----AQHFDFEKLPAVIVY-KEEQHHFYPHGHL- 215
            :.:..:...||.| ..|..|.....:||..     |..|.....|.:.|: |.|:...|..|.. 
Zfish   194 KNLEPEWTAAATEVKEQTKGKVRLAAEDATVHQGLASRFGIRGFPTIKVFRKGEEPEDYQGGRTR 258

  Fly   216 ------AHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQLLKT--NKYLVLAVVQEDKLNQIA 272
                  |.|:..:.:.....|.|             .|...|.||  :..|.:..|....|:..|
Zfish   259 SDIVARALELYSDNIPAPELQEV-------------LNEGILKKTCEDYQLCIIAVLPHILDTGA 310

  Fly   273 THELEFRDMVEGVIRKHRARYHDKFQFGWI-----GEPSIAHSIILDQLPTPHLIAINSSTQHHF 332
            :....:.::::.:..||:     |..:||:     .:..:..|:.:.....|.:.||||......
Zfish   311 SGRNSYLEVMKTMAEKHK-----KKMWGWLWTEAGAQMELEASLGIGGFGYPAMAAINSRKMKFA 370

  Fly   333 IPEDDPMQMTPQALHLFLESI---RNESAIAYGG 363
            :.:.   ..:...:|.||..:   |..:|...||
Zfish   371 LLKG---SFSETGIHEFLRELSVGRGSTATVGGG 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 39/126 (31%)
ER_PDI_fam 28..>355 CDD:273457 88/391 (23%)
pdia6NP_922915.2 PDI_a_P5 26..128 CDD:239299 36/102 (35%)
PDI_a_P5 161..266 CDD:239299 21/108 (19%)
P5_C 275..404 CDD:239281 28/148 (19%)

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