DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and prtp

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_572742.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster


Alignment Length:224 Identity:55/224 - (24%)
Similarity:92/224 - (41%) Gaps:45/224 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KVLELS-DRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFA-LVAQALHATNVRVGRLDCTKYPAAA 89
            ||::|: |.|......|...|.|:||||.:|::..|.:. |..:.:....|.:.::|||::.:..
  Fly   167 KVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRLAPTWEDLAKELIKEPTVTISKIDCTQFRSIC 231

  Fly    90 KEFKVRGYPTIMFIK-GNMEFTYNGDRGRDELVDYALRMSGPPVQLVTRTES------VDMLKGS 147
            ::|:|:||||:::|: |.....|:|.|....|..|..:|.|.|:: .|..|:      ::.:.|.
  Fly   232 QDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKTYVEKMVGVPLE-KTAGEAGDEKVVIEEVAGE 295

  Fly   148 HTIFFIFVGQQ------------EGVVWDTYYA----------------AAEGYQEHGFFYATSE 184
            .........||            |||.:..:||                |.|.:|..........
  Fly   296 EDAAKKLTPQQLTGEDEFDQAIAEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKV 360

  Fly   185 DIAAQH-------FDFEKLPAVIVYKEEQ 206
            |..|..       ...|..|.:.:||..|
  Fly   361 DCTAPENKQVCIDQQVEGYPTLFLYKNGQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 32/103 (31%)
ER_PDI_fam 28..>355 CDD:273457 54/223 (24%)
prtpNP_572742.1 PDI_a_ERp46 38..140 CDD:239303
PDI_a_ERp46 167..267 CDD:239303 31/99 (31%)
PDI_a_ERp46 303..407 CDD:239303 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.

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