DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and Txndc11

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001121004.1 Gene:Txndc11 / 302899 RGDID:1307538 Length:947 Species:Rattus norvegicus


Alignment Length:463 Identity:94/463 - (20%)
Similarity:165/463 - (35%) Gaps:140/463 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKVLELSDRFID----VRHEGQWLVM-FYAPWCGY------------------------------ 55
            |.||:|....:|    ||.:.:.:|: |||||||.                              
  Rat   101 SPVLDLFQGQLDYADHVRQDSEVVVLFFYAPWCGQSIAARAEIEQAASRLSDQVLFVAVNCWWNQ 165

  Fly    56 --CKKTEPIFALVAQALHATNVRVGRLDCTKYPAAA---KEFKVRGYPTIMFIKGN---MEFTYN 112
              |:|.:..|..  ..:|..:...|.:: .|.|.:|   ::|..|....:::|...   ::|..|
  Rat   166 GKCRKQKHFFYF--PVIHLYHRSFGPIE-YKGPMSAVYIEKFVRRVMKPLLYIPSQSELLDFLSN 227

  Fly   113 GDRGRDELVDYALRMSG---PPVQLVTRTESVDMLKGSH--TIFFIFVGQQEGVVWDTYYAAAEG 172
            .:.|   ::.| ...||   ||..|...|.::..||..:  |:.|       ||:.:.:.|....
  Rat   228 YEPG---VLGY-FEFSGSPQPPGYLTFFTSALHSLKKDYLGTVRF-------GVITNKHLAKLVS 281

  Fly   173 YQEHGFFYATSEDIAAQHFDFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERF 237
            ....|..|      ..:||:     ..:|:..|..:|              ..|.:::|.:..:.
  Rat   282 LVHSGSVY------LHRHFN-----TSLVFPREVMNF--------------TAENIYKWASENQE 321

  Fly   238 TLFPKVTRFNIHQLLKTNK---------YLVLAVVQE-----DKLNQIATHELEFRD-----MVE 283
            |||..:.......||..|:         ::....:.|     |::.::|   ||:.:     :||
  Rat   322 TLFRWLQPHGGKSLLLNNELKKGPALFLFIPFDPLAERHPLLDEITEVA---LEYSNCRGDQVVE 383

  Fly   284 GVIRKHRARYHDKFQFGWIGEPSIAHSIILDQLPTP--HLIAINSSTQHHFIPEDDPMQMTPQAL 346
            .:::..|......||       |:|..:   |.|.|  .|:|.:.......:|:...:..|    
  Rat   384 RLLQHLRRAEAPVFQ-------SLAPEL---QAPLPDAQLMAASPCCNTVVLPQGPALSRT---- 434

  Fly   347 HLFLESIRNESAIAYGGDTYFVRLNR-ALFEVRRALRDMWLGNPVLTTVIFGLPLGFLSLIMYSI 410
            |...|...|:|.   |.....|.:.: :.||:..||...:|.......|:.|           ||
  Rat   435 HNVCELCVNQSV---GTRPSSVSVPQCSFFEMAAALDSFYLKEQTFYRVVSG-----------SI 485

  Fly   411 FCGDCLVT 418
            .|.:.|.:
  Rat   486 ECSNFLTS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 29/143 (20%)
ER_PDI_fam 28..>355 CDD:273457 78/395 (20%)
Txndc11NP_001121004.1 PDI_a_EFP1_N 93..205 CDD:239304 23/106 (22%)
Thioredoxin_6 260..396 CDD:463999 28/170 (16%)
PDI_a_PDI_a'_C 660..762 CDD:239293
Blue background indicates that the domain is not in the aligned region.

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