DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5027 and Txndc11

DIOPT Version :9

Sequence 1:NP_648847.3 Gene:CG5027 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001121004.1 Gene:Txndc11 / 302899 RGDID:1307538 Length:947 Species:Rattus norvegicus


Alignment Length:463 Identity:94/463 - (20%)
Similarity:165/463 - (35%) Gaps:140/463 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKVLELSDRFID----VRHEGQWLVM-FYAPWCGY------------------------------ 55
            |.||:|....:|    ||.:.:.:|: |||||||.                              
  Rat   101 SPVLDLFQGQLDYADHVRQDSEVVVLFFYAPWCGQSIAARAEIEQAASRLSDQVLFVAVNCWWNQ 165

  Fly    56 --CKKTEPIFALVAQALHATNVRVGRLDCTKYPAAA---KEFKVRGYPTIMFIKGN---MEFTYN 112
              |:|.:..|..  ..:|..:...|.:: .|.|.:|   ::|..|....:::|...   ::|..|
  Rat   166 GKCRKQKHFFYF--PVIHLYHRSFGPIE-YKGPMSAVYIEKFVRRVMKPLLYIPSQSELLDFLSN 227

  Fly   113 GDRGRDELVDYALRMSG---PPVQLVTRTESVDMLKGSH--TIFFIFVGQQEGVVWDTYYAAAEG 172
            .:.|   ::.| ...||   ||..|...|.::..||..:  |:.|       ||:.:.:.|....
  Rat   228 YEPG---VLGY-FEFSGSPQPPGYLTFFTSALHSLKKDYLGTVRF-------GVITNKHLAKLVS 281

  Fly   173 YQEHGFFYATSEDIAAQHFDFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERF 237
            ....|..|      ..:||:     ..:|:..|..:|              ..|.:::|.:..:.
  Rat   282 LVHSGSVY------LHRHFN-----TSLVFPREVMNF--------------TAENIYKWASENQE 321

  Fly   238 TLFPKVTRFNIHQLLKTNK---------YLVLAVVQE-----DKLNQIATHELEFRD-----MVE 283
            |||..:.......||..|:         ::....:.|     |::.::|   ||:.:     :||
  Rat   322 TLFRWLQPHGGKSLLLNNELKKGPALFLFIPFDPLAERHPLLDEITEVA---LEYSNCRGDQVVE 383

  Fly   284 GVIRKHRARYHDKFQFGWIGEPSIAHSIILDQLPTP--HLIAINSSTQHHFIPEDDPMQMTPQAL 346
            .:::..|......||       |:|..:   |.|.|  .|:|.:.......:|:...:..|    
  Rat   384 RLLQHLRRAEAPVFQ-------SLAPEL---QAPLPDAQLMAASPCCNTVVLPQGPALSRT---- 434

  Fly   347 HLFLESIRNESAIAYGGDTYFVRLNR-ALFEVRRALRDMWLGNPVLTTVIFGLPLGFLSLIMYSI 410
            |...|...|:|.   |.....|.:.: :.||:..||...:|.......|:.|           ||
  Rat   435 HNVCELCVNQSV---GTRPSSVSVPQCSFFEMAAALDSFYLKEQTFYRVVSG-----------SI 485

  Fly   411 FCGDCLVT 418
            .|.:.|.:
  Rat   486 ECSNFLTS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5027NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 29/143 (20%)
ER_PDI_fam 28..>355 CDD:273457 78/395 (20%)
Txndc11NP_001121004.1 PDI_a_EFP1_N 93..205 CDD:239304 23/106 (22%)
PDI_b_family 215..319 CDD:239279 27/139 (19%)
Thioredoxin_6 254..396 CDD:290560 30/176 (17%)
PDI_a_PDI_a'_C 660..762 CDD:239293
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350320
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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