DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and Tmx4

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001093999.1 Gene:Tmx4 / 296182 RGDID:1305146 Length:336 Species:Rattus norvegicus


Alignment Length:144 Identity:37/144 - (25%)
Similarity:60/144 - (41%) Gaps:17/144 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EGQWLVMFYAPWCGYCKKTEPIFALVAQALHATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKG 105
            ||:|::.||||||..|::|:..:...|:......:.||::|..:.|..:..|.|...|.....|.
  Rat    50 EGEWMLKFYAPWCPSCQQTDSEWETFAKNGETLQISVGKVDVIQEPGLSGRFFVTTLPAFFHAKD 114

  Fly   106 NMEFTYNGDRGRDELVDYALRMSGPPVQLVTRTESVDML--KGSHTIFFIFVGQQEGVVWDTYYA 168
            .:...|.|....::|.:|.|......|:.:|..:|...|  .|...:|.|     .|.:|..   
  Rat   115 GIFRRYRGPGIYEDLQNYILEKKWQSVEPLTGWKSPASLTMSGMAGLFSI-----SGKIWHL--- 171

  Fly   169 AAEGYQEHGFFYAT 182
                   |.:|..|
  Rat   172 -------HNYFTVT 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 25/86 (29%)
ER_PDI_fam 28..>355 CDD:273457 37/144 (26%)
Tmx4NP_001093999.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 35..135 CDD:469754 24/84 (29%)
PTZ00121 <218..>334 CDD:173412
Blue background indicates that the domain is not in the aligned region.

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