DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and Pdilt

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_038963539.1 Gene:Pdilt / 293544 RGDID:1307822 Length:615 Species:Rattus norvegicus


Alignment Length:384 Identity:74/384 - (19%)
Similarity:133/384 - (34%) Gaps:98/384 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLTLGSTGLSSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQAL--HATNVRVG 78
            |:.|...||:..:.|  .||:        :|:|:.|.....:|........|:..  ....:..|
  Rat    67 LMVLTPAGLTQTLNE--TRFL--------MVIFHNPTLKQSRKLAKELGKAAEIFGKGKNGLGFG 121

  Fly    79 RLDCTKYPAAAKEFKVRGYPTI-MFIKGN----------MEFTYNGDRGRDELVDYALRMSGPPV 132
            ::|.|......:||.:...|.: :|.:||          :|.|        .||.:..|......
  Rat   122 KVDITMETELKQEFDITHAPELKLFYEGNRLEPISCKDVVEST--------ALVVWLRRQISKKA 178

  Fly   133 QLVTRTESV-DMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQE-----------HGFFYATSED 185
            .|...:..| |.:|....:...|....|..|.:.:|...:.:.|           .|.|:..   
  Rat   179 LLFNNSNEVADFVKSRPLVIVGFFQDLEEEVAELFYDTIKDFPELTFGAIQIKNSFGRFHVI--- 240

  Fly   186 IAAQHFDFEKLPAVIVYKEEQHHFYPHGHLA--HEMDPNEVNETVFQWVNVERFTLFPKVTRFN- 247
                      |.:|:|:|:        |.:.  .|:..:..|:.....|..::.|.|  |..|| 
  Rat   241 ----------LDSVLVFKK--------GRVVKRQELINDSTNKDYLNQVIKQQLTGF--VIEFNP 285

  Fly   248 -----IHQLLKTNKYLVLAVVQEDKLNQIATH----ELEFRDMVEGVI----RKHRARYHDKFQF 299
                 |:::...|..|:......:..:.|..|    ..||::.:..|:    .....|..:.||.
  Rat   286 ENKDLIYEMNILNHMLLFISKNSEPYSTIIRHYRQISKEFQNKILFVLVNSDEPKNKRIFEYFQI 350

  Fly   300 GWIGEPSIAHSIILDQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFLESIRNESA 358
            ..:..||:.   ||:.          ||...:.:|.|:   :|.::|..|..|..:.:|
  Rat   351 SRVNVPSVQ---ILNL----------SSDARYKMPTDN---ITFESLKKFCNSFLSRTA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 22/113 (19%)
ER_PDI_fam 28..>355 CDD:273457 69/367 (19%)
PdiltXP_038963539.1 ER_PDI_fam 69..523 CDD:273457 73/382 (19%)

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