DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and pdi-2

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_508778.1 Gene:pdi-2 / 180724 WormBaseID:WBGene00003963 Length:493 Species:Caenorhabditis elegans


Alignment Length:377 Identity:87/377 - (23%)
Similarity:160/377 - (42%) Gaps:73/377 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFGLISALLLTLGSTGLSSKVLE--------LSDRFIDVRHEGQW-LVMFYAPWCGYCKKTEPIF 63
            :|.|:....|.||:   |:.|:|        ..|.|.:|.:..:: ||.|||||||:||...|.:
 Worm     1 MFRLVGLFFLVLGA---SAAVIEEEENVIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEY 62

  Fly    64 ALVAQAL--HATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDYALR 126
            |..|..|  ..:::::|:||.|.:...:.:|:||||||:...:......|||.|..|.::.:..:
 Worm    63 AKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLFRNGKPQEYNGGRDHDSIIAWLKK 127

  Fly   127 MSGPPVQLVTRTESVDMLKGSHTIFFIFVGQQEGVVWD---TYYAAAEGYQEHGFFYATSEDIAA 188
            .:||..:.:...::|..|:.|..:  :.:|..:....|   |:...|.|..:..|..:| ||...
 Worm   128 KTGPVAKPLADADAVKELQESADV--VVIGYFKDTTSDDAKTFLEVAAGIDDVPFGIST-EDAVK 189

  Fly   189 QHFDFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTR-------- 245
            ...:. |...::::|:     :..|.:|  .|.....:.:..|:...|..|..:.|:        
 Worm   190 SEIEL-KGEGIVLFKK-----FDDGRVA--FDEKLTQDGLKTWIQANRLALVSEFTQETASVIFG 246

  Fly   246 --FNIHQLLKTNKYLVLAVVQEDKLNQIATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIA 308
              ...|.||..:|          :.::.|..|.||::..:        ::..|..|.:|......
 Worm   247 GEIKSHNLLFVSK----------ESSEFAKLEQEFKNAAK--------QFKGKVLFVYINTDVEE 293

  Fly   309 HSIIL-------DQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFLESI 353
            ::.|:       |:||...||::          |:|..:..|....:..|:|
 Worm   294 NARIMEFFGLKKDELPAIRLISL----------EEDMTKFKPDFEEITTENI 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 36/111 (32%)
ER_PDI_fam 28..>355 CDD:273457 81/357 (23%)
pdi-2NP_508778.1 ER_PDI_fam 23..471 CDD:273457 79/352 (22%)

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