DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmx3 and dpy-11

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001370731.1 Gene:dpy-11 / 179040 WormBaseID:WBGene00001073 Length:246 Species:Caenorhabditis elegans


Alignment Length:117 Identity:33/117 - (28%)
Similarity:60/117 - (51%) Gaps:4/117 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LISAL-LLTLGSTG---LSSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALH 71
            |::.| |..:|.:|   .|||::.|::.......:|:|::.|:||||..||..:..:...|....
 Worm     5 LLAVLGLFAVGVSGGPTRSSKLVFLNEENWTDLMKGEWMIEFHAPWCPACKDLQKAWNAFADWSD 69

  Fly    72 ATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDY 123
            ...::||.:|.|..|..:..|.|...|||..:|..:...|:|.|.:::.:.:
 Worm    70 DLGIKVGEVDVTVNPGLSGRFLVTALPTIYHVKDGVFRQYSGARDKNDFISF 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 26/97 (27%)
ER_PDI_fam 28..>355 CDD:273457 25/96 (26%)
dpy-11NP_001370731.1 PDI_a_TMX 24..124 CDD:239292 27/98 (28%)

Return to query results.
Submit another query.