DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmx3 and C14B9.2

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_498775.2 Gene:C14B9.2 / 176147 WormBaseID:WBGene00015752 Length:618 Species:Caenorhabditis elegans


Alignment Length:299 Identity:73/299 - (24%)
Similarity:125/299 - (41%) Gaps:47/299 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LVMFYAPWCGYCKKTEPIFALVAQALHA--TNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNM 107
            ||.|||||||:|||..|.:...||.|.|  :.|::|::|.|.......::.|.||||:..|:...
 Worm   168 LVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKIIRNGR 232

  Fly   108 EFTYNGDRGRDELVDYALRMSGPPVQLVTRTESVDMLKGSHTIFFI-FVGQQEGVVWDTYYAAAE 171
            .|.|||.|....::.|....|.|..:.:.:.:.|:.......:..| |...::...::.:..:||
 Worm   233 RFDYNGPREAAGIIKYMTDQSKPAAKKLPKLKDVERFMSKDDVTIIGFFATEDSTAFEAFSDSAE 297

  Fly   172 GYQEHGFFYATSEDIAAQHFDFEKLPA----VIVYKEEQHHFYPHGHLAH-EMDPNE-------- 223
            ..:|.......:.|.||    |:|..|    :|:       |||  .|.| :.:|..        
 Worm   298 MLREEFKTMGHTSDPAA----FKKWDAKPNDIII-------FYP--SLFHSKFEPKSRTYNKAAA 349

  Fly   224 VNETVFQWVNVERFTLFPKVTRFNIHQLLKTNKYLVLAVVQEDKLNQIATHELEFRDMVEGVIRK 288
            .:|.:..:.......|..|:|:.|. ....|.|.||:.....|...|.......:|..|..:.:|
 Worm   350 TSEDLLAFFREHSAPLVGKMTKKNA-ATRYTKKPLVVVYYNADFSVQYREGSEYWRSKVLNIAQK 413

  Fly   289 HRARYHDKFQFG--------------WIGEPSIAHSIIL 313
            ::   .||::|.              .:|:..:.|::::
 Worm   414 YQ---KDKYKFAVADEEEFAKELEELGLGDSGLEHNVVV 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 33/84 (39%)
ER_PDI_fam 28..>355 CDD:273457 73/299 (24%)
C14B9.2NP_498775.2 pdi_dom 41..138 CDD:273454
ER_PDI_fam 147..616 CDD:273457 73/299 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.