DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmx3 and pdi-3

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_491995.1 Gene:pdi-3 / 172433 WormBaseID:WBGene00003964 Length:488 Species:Caenorhabditis elegans


Alignment Length:324 Identity:83/324 - (25%)
Similarity:136/324 - (41%) Gaps:70/324 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MWIFGLISALLLTLGSTGLSSKVLELSDRFID--VRHEGQWLVMFYAPWCGYCKKTEPIFALVAQ 68
            :|:...:.|..|...|.|  ..|||.:|...|  ::.....||.|||||||:|||..|.:...|.
 Worm     2 IWVQAALVASFLAFASAG--GAVLEYTDGNFDDLIQTHDIALVKFYAPWCGHCKKIAPEYERAAP 64

  Fly    69 ALHATN---VRVGRLDCTKYPAAAKEFKVRGYPTI-MFIKGNMEFTYNGDRGRDELVDYALRMSG 129
            .| |:|   |.:.::|||.......:|.|:|:||: :|..|.....|:|.|..|.:|.:....||
 Worm    65 KL-ASNDPPVALVKVDCTTEKTVCDKFGVKGFPTLKIFRNGVPAQDYDGPRDADGIVKFMRGQSG 128

  Fly   130 P-PVQLVTRTESVDMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQEH-GFFYATSEDI--AAQH 190
            | ..:|.|..|......|...:...|. :.|..:.|:|...|:..::. .|.:.:::||  .|.:
 Worm   129 PSSKELKTVAEFEKFTGGDENVVIGFF-ESESKLKDSYLKVADTERDRFSFAHTSNKDIIKKAGY 192

  Fly   191 FDFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNE----------------VNETV----------- 228
            .|     .|:|:..::.|        ::.|.||                |:|||           
 Worm   193 SD-----DVVVFVPKKLH--------NKFDTNEFKYDGNYDTDKIKNFLVHETVGFAGIRTQGNL 244

  Fly   229 FQ---------WVNVERFTLFPKVTRFNIHQLLKTNKYLVLAVVQEDKLNQIATHELEFRDMVE 283
            ||         :.||: :...||.:.:      ..|:.|.:|...:.|:....:::.||...:|
 Worm   245 FQFEQKPIVIVYYNVD-YVKDPKGSNY------WRNRVLKVAQNYKRKVQFAVSNKEEFSSEIE 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 38/106 (36%)
ER_PDI_fam 28..>355 CDD:273457 78/302 (26%)
pdi-3NP_491995.1 ER_PDI_fam 21..477 CDD:273457 78/303 (26%)

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