DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmx3 and Pdi

DIOPT Version :10

Sequence 1:NP_648847.3 Gene:Tmx3 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_061510732.1 Gene:Pdi / 1280308 VectorBaseID:AGAMI1_010164 Length:549 Species:Anopheles gambiae


Alignment Length:366 Identity:89/366 - (24%)
Similarity:166/366 - (45%) Gaps:52/366 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LISA--LLLTLGSTGLSSK-------VLELS-DRFIDVRHEGQW-LVMFYAPWCGYCKKTEPIFA 64
            |:||  |:|...:..|:::       ||.|: |.|..|....:: ||.|||||||:||...|.:|
Mosquito     3 LLSAFGLVLAFATVALAAEEVKTEDGVLVLTKDNFDSVIANNEFVLVEFYAPWCGHCKALAPEYA 67

  Fly    65 LVAQAL--HATNVRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDYALRM 127
            ..|:.|  ..:|:::.::|.|..|..|:::.:|||||:.|.:...:..|.|.|.:|.:|.:..:.
Mosquito    68 KAAKVLADKESNIKLAKVDATVEPELAEKYGIRGYPTLKFFRSGSQVDYTGGREQDTIVSWLEKK 132

  Fly   128 SGPPV-QLVTRTESVDMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHF 191
            :||.. :|.|...:.:.||.::.....|...::......:.:.|....::.|...:||::.|:: 
Mosquito   133 TGPAAKELETVEAAEEFLKENNVAVVGFFKDRDSKEAKAFMSTAVAVDDYPFGVTSSEEVYAKY- 196

  Fly   192 DFEKLPAVIVYKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQLL--KT 254
             ..|..:||::|    || ..|....|.:..|  |.:.::|..:...|....:.....::.  :.
Mosquito   197 -EAKCGSVILFK----HF-DEGKAVFEGEATE--EALKKFVTAQALPLIVDFSHETAQKIFGGEI 253

  Fly   255 NKYLVLAVVQEDKLNQIATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIAHSIIL------ 313
            ..:|:..:.:|      |.|..||.:..:.|.:|.|    ::..|..|......|:.||      
Mosquito   254 KSHLLFFISKE------AGHLKEFVEPAKEVAKKFR----EQILFVTIDADQEDHTRILEFFGMK 308

  Fly   314 -DQLPTPHLIAINSSTQHHFIPEDDPMQMTPQALHLFLESI 353
             |::|:..:|.:          |:|..:..|:...|..:.|
Mosquito   309 KDEVPSLRIIRL----------EEDMAKYKPETNDLSADKI 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmx3NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 37/111 (33%)
ER_PDI_fam 28..>355 CDD:273457 83/340 (24%)
PdiXP_061510732.1 None

Return to query results.
Submit another query.