DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5027 and tmx3

DIOPT Version :9

Sequence 1:NP_648847.3 Gene:CG5027 / 39775 FlyBaseID:FBgn0036579 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002939661.2 Gene:tmx3 / 100493559 XenbaseID:XB-GENE-946768 Length:454 Species:Xenopus tropicalis


Alignment Length:424 Identity:129/424 - (30%)
Similarity:236/424 - (55%) Gaps:28/424 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLTLGSTGL------SSKVLELSDRFIDVRHEGQWLVMFYAPWCGYCKKTEPIFALVAQALHAT 73
            :|.|:.||.|      |:.|.:|.|.|.:.|.:..|||.|||||||:|||.||::..|...:.::
 Frog     9 ILATVASTSLLASLPVSALVEDLDDSFKENRKDDIWLVDFYAPWCGHCKKLEPVWNEVGIEMRSS 73

  Fly    74 N--VRVGRLDCTKYPAAAKEFKVRGYPTIMFIKGNMEFTYNGDRGRDELVDYALRMSGPPVQLVT 136
            .  :|||::|.|.:.:.|.||.|||:|||..:||:|.:.|.|.|.::::|::|.|::||.::.:.
 Frog    74 GSPIRVGKMDATVHSSIASEFGVRGFPTIKVLKGDMAYNYRGPRTKEDIVEFANRVAGPLIRPLP 138

  Fly   137 RTESVDMLKGSHTIFFIFVGQQEGVVWDTYYAAAEGYQEHGFFYATSEDIAAQHFDFEKLPAVIV 201
            ..:..|.::..|::.|::|| .|..:.:.|...|.....:.:|::.|||:..::....::|||:|
 Frog   139 SQQMFDHVQKRHSVLFVYVG-VESTLKEKYIEVASELIVYTYFFSASEDVLPKYVTLNEVPAVLV 202

  Fly   202 YKEEQHHFYPHGHLAHEMDPNEVNETVFQWVNVERFTLFPKVTRFNIHQLLKTNKYLVLAVVQED 266
            :|:..:..|      .|.:..:::    .|||.|||..:..:..|.:::|..|.|.:.:||:.| 
 Frog   203 FKDSTYFVY------DEYEDGDLS----SWVNKERFEGYLHIDGFTLYELGDTGKLVAVAVIDE- 256

  Fly   267 KLNQIATHELEFRDMVEGVIRKHRARYHDKFQFGWIGEPSIAHSIILDQLPTPHLIAINSSTQHH 331
            |.|.:  .....:.:.:.|.:.:|..:|..||||.:......:|:::|:|..|..:.:|:|.|.:
 Frog   257 KNNSV--EHTRLKSIAQDVAKNYRDHFHRDFQFGHMDGNDYINSLLMDELSIPTFVVLNTSNQQY 319

  Fly   332 FIPEDDPMQMTPQALHLFLESIRNESAIAYGGDTYFVRLNRALFEVRRALRDMWLGNPVLTTVIF 396
            |:|... ::.|.:.:. |:.||.:.:|.|.|||....|:.|..::.:..:..::..:|:|...:|
 Frog   320 FLPSKQ-IENTEEMIQ-FINSILDGTAEAQGGDGILQRIKRVFYDAKSTVVSVFKSSPLLGCFLF 382

  Fly   397 GLPLGFLSLIMYSIFCGDCLVTEEDPDEDHEKKE 430
            |||||.:|::.|.|    |....||..|:..:|:
 Frog   383 GLPLGVISIMCYGI----CTADTEDGSEEMTRKD 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5027NP_648847.3 PDI_a_TMX3 27..128 CDD:239298 44/102 (43%)
ER_PDI_fam 28..>355 CDD:273457 100/328 (30%)
tmx3XP_002939661.2 PDI_a_TMX3 27..130 CDD:239298 44/102 (43%)
ER_PDI_fam 29..>346 CDD:273457 100/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8334
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10381
Inparanoid 1 1.050 217 1.000 Inparanoid score I3503
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330414at33208
OrthoFinder 1 1.000 - - FOG0006149
OrthoInspector 1 1.000 - - oto104895
Panther 1 1.100 - - LDO PTHR46426
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2103
SonicParanoid 1 1.000 - - X5395
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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