DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)72Dn and K05C4.5

DIOPT Version :9

Sequence 1:NP_001261930.1 Gene:l(3)72Dn / 39774 FlyBaseID:FBgn0263605 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_493567.2 Gene:K05C4.5 / 173339 WormBaseID:WBGene00010582 Length:686 Species:Caenorhabditis elegans


Alignment Length:735 Identity:133/735 - (18%)
Similarity:275/735 - (37%) Gaps:144/735 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QVHN-VRFYTIKPREIVSLAYSKSSKCLALSRATPVIELWNLEHAPYLDRVIHLPTDSHVESIAW 79
            :.|: :.||.|            .|..||:...|...|..::||..::|                
 Worm    41 ETHDYIEFYNI------------LSSWLAIPELTVCPENGSIEHLLFVD---------------- 77

  Fly    80 AGNRLFSVDLSGKLIEWDVIKLKQRYEHSPTGNALWSIDVNPAETDIAIGSEEGHINILSIENDE 144
             ...|.|...:|.:...|...:::......:.:.:|:. ....|..||:.|   |.::|..  .:
 Worm    78 -NGELMSSHANGSVCFIDPHNIERIKRIQISASTIWAA-CKHTENTIAMIS---HSSVLYF--FD 135

  Fly   145 ITYKSLFNKQKGRVLCIKFD--KTGTKLVTGT-EGFVRIWNVLKGTTLHTMTLSEKN----VIVW 202
            ::.|.:.:.....|....||  ..||.:..|: :|.:...:   |....|:.|...|    .|.|
 Worm   136 VSTKMIISSISLGVESRLFDVSSNGTIVAIGSIDGVIIAGD---GKVQQTLKLDRLNRRDPTIAW 197

  Fly   203 SLQVLSDNTIIAGDSAGFVTVWDADNATQIDSTRVLDKNVFALAVNNKEDRLVCSGMQPPLIRIF 267
            |:..:..:.:..|||.|.||.|:..:.:.|.|...|..::.|: |:.....|..:|:.|.:    
 Worm   198 SVLFVKPSLLACGDSRGTVTFWNPIDGSLIQSISCLQSHILAM-VSTDNSTLNIAGVDPRI---- 257

  Fly   268 SKTKIKREESTSERWIKFLQRDAHKHYVKSLLVIDDQIYSGGRD-GILTITSS-ERMQAHLSQHA 330
              |:::...:.:...:.  :|......|:|:.|.::.|::.|.| .:.|..|. :::..|..:  
 Worm   258 --TELRETRNGNYEIVN--RRTGPARDVRSMAVYENIIFAAGEDFDVYTCKSGCQKLMFHQQK-- 316

  Fly   331 PFLKGSVASMAISKKLLLLRYPNSVH-LWRLGSVAPQGEDKKKPWALPVGHTEEQLLELPPQKLL 394
                    ::.::..:::....|.:. :|:     ..|||:....::.:....|.:      .|.
 Worm   317 --------NLHVASDIVVSAGENYLDVMWK-----QSGEDEPSEGSVILQQHYEMI------HLA 362

  Fly   395 QLNVKEHNFIQSAAISSDANWICYSTLKELRISRLKSDPLQVERLVDDLPEELQPASHIIFTKQG 459
            ::...:...|...|.|...|.|...|..::.|.::.....::.|.|.........|:.:..||  
 Worm   363 KIFTPKKRIITCWAASPYGNLIAIGTCHDVTIYKISPMVKKINRKVVKTATLDVCATSLSITK-- 425

  Fly   460 DLVLLNPQNNHLSWFTLEEDLVTFKYTID----------LSEKCKNTISHVVISSHGEYI-VAAS 513
                      :|.::..:.|....::.::          :|:....::|.:|.|..|.|| |..:
 Worm   426 ----------NLRFYVAKSDFEVLEFDLETENGKELKSIISQADCGSVSRMVSSPCGNYICVLTT 480

  Fly   514 SDHIISVWKLHGKQYKHLLNLPRHRA--GTTALSM----------HEDYPRVV--VAYANGQLVE 564
            ...|.|:....|:.....::||....  .|:|..:          .:|..::.  |..:||    
 Worm   481 RSQIFSINTETGESRLLKVDLPIDMTINSTSAFVLSTITPNDSNNQQDTKKIFHEVNLSNG---- 541

  Fly   565 YDLVNRIFTCETNEYLIPETRRHCING-----ISLDPQNRNIFIVHTEGNLYVLE---------R 615
              |:.| ..|.....::|.:.:..|.|     |.:|  :..|.....:|:..:|:         :
 Worm   542 --LIKR-SACSNQLRMLPSSPKSLIPGQPIYLIGID--SNKIMTASYDGHWSILDVESGTVVSAQ 601

  Fly   616 DQHLDP-KELVSNSKSKKLSNGN--RSSVDGGSKGLSLKTTLSRQVRLHLVHVSRLSPNELVNVS 677
            |..|.. |:...|..::.|.||.  |..|:....|:|......|....:.:...:...:.:|.:.
 Worm   602 DGPLKANKKQRENEDTRLLVNGMRLREEVEQNGDGMSPSKRTRRNSFKNEIPPFQSMNSRIVQLE 666

  Fly   678 ISTNNLLAPLPPPYQRKKFG 697
            ::.:.:  |....::.||||
 Worm   667 VTGDEI--PKTAGFKIKKFG 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72DnNP_001261930.1 WD40 20..268 CDD:295369 52/254 (20%)
WD40 57..529 CDD:225201 87/492 (18%)
WD40 repeat 74..106 CDD:293791 4/31 (13%)
WD40 repeat 115..151 CDD:293791 8/35 (23%)
WD40 repeat 158..193 CDD:293791 9/37 (24%)
WD40 repeat 283..331 CDD:293791 10/49 (20%)
WD40 repeat 453..489 CDD:293791 4/45 (9%)
WD40 <494..>603 CDD:295369 27/128 (21%)
WD40 repeat 498..536 CDD:293791 11/38 (29%)
K05C4.5NP_493567.2 WD40 <59..297 CDD:225201 53/272 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2048
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005067
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102666
Panther 1 1.100 - - LDO PTHR44163
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1621
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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