DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5151 and ldlrad4b

DIOPT Version :10

Sequence 1:NP_648844.1 Gene:CG5151 / 39772 FlyBaseID:FBgn0036576 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_009290741.1 Gene:ldlrad4b / 556780 ZFINID:ZDB-GENE-091230-3 Length:310 Species:Danio rerio


Alignment Length:160 Identity:39/160 - (24%)
Similarity:64/160 - (40%) Gaps:36/160 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 QHYQYQLQQQQTPRCPHHVPLP------DSE----YGQDRHLQIRSSYQQSEITRSYTKPPPNKT 242
            ||.:::..|...|...|.:.||      |.|    |.....||:|...||.|:.|...:.|||:|
Zfish   147 QHNRFRRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRT 211

  Fly   243 VRD---VPEQISAGGCGVSSSSYRLTTLQAASSTYTPAGVSVSASSSSSKSK--PNAITKFFSRI 302
            :.|   :....||||.|....|             :.:|:|.::||:..:.:  |.|.::...:.
Zfish   212 IFDSDLIDMHSSAGGGGPRPPS-------------SNSGISAASSSTHGRMEGPPPAYSQVIGQH 263

  Fly   303 SS--------PKSPPSCTMTSVATASPASS 324
            |.        ..:||....|.:...:..:|
Zfish   264 SGIVLYLQQHSNNPPVTVQTPLTGRTDPNS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5151NP_648844.1 None
ldlrad4bXP_009290741.1 LDLa 17..47 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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