DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elg1 and AT1G77620

DIOPT Version :9

Sequence 1:NP_996103.1 Gene:elg1 / 39770 FlyBaseID:FBgn0036574 Length:1162 Species:Drosophila melanogaster
Sequence 2:NP_177885.1 Gene:AT1G77620 / 844097 AraportID:AT1G77620 Length:1151 Species:Arabidopsis thaliana


Alignment Length:710 Identity:150/710 - (21%)
Similarity:260/710 - (36%) Gaps:172/710 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 PRSRRISSMDAQNQIVESKPPVVKAKDQDPGTE---ELLSKLSSPTKKRDSLLGYFPKVESPKEL 335
            || |.:.....|:.::..||..|...:.||..:   |:....|...|.|..      |..:||..
plant     5 PR-RNVRRKLVQSSLLPHKPEDVIDSNGDPMCDEGGEVGDGRSQGKKTRKQ------KERTPKNG 62

  Fly   336 AEKVIIAIETPPMETPKRRTLRR--KSQQETPIVAESTPSSRPRRSCVGKARYDYDLETSPGKQ- 397
            |.|.:...::|...|||:...:.  .:..:..|.|..:|.. |......|.|.:.:...|.||| 
plant    63 ATKKVAKGKSPRKTTPKKCATKNGIVAAGDQMIAANVSPPV-PNLRLEAKLRAEENSRMSAGKQI 126

  Fly   398 ----------QKAKPQKADES----------------VEIID-LDNSNPAATPKKLAPLFVRQLP 435
                      ::.:...|.|:                :.:.| ..:..|.....|....:.:...
plant   127 HPFFSTWKGGKRNQEAVAAENGTCLGRGRDKIVTIGPIHVFDKFQDDYPTTLDWKNWTFYEQTST 191

  Fly   436 KPSPDPSVLKARQAFLQSGVPDKIRQEQIRQKNFDQMYEDSYEVFPRLAHIGCESFGSKNGPLDI 500
            ..|||..:              |....:.|.|.||      ....|.|:|               
plant   192 TESPDQQI--------------KFNSLEPRPKEFD------LNELPSLSH--------------- 221

  Fly   501 PFALRAEEEYSEVTKALPANKRRAKASSITSCLPADFTSSKTLNKFNYATLPQLENKR---GFVK 562
            |.....::|  |..:....::..|:|||:                   ..:...|.||   ||:.
plant   222 PDVCVIDDE--EPEQCTSQSEGIAEASSV-------------------VLIEDQEEKRGCLGFLD 265

  Fly   563 LWKNDFDRFPTFKCYNQMREKYRHFSAIDSAQDTQQMGESLVVTRRTRRSMEQNMAQNEEEAKPP 627
            ..::|        |  ::.|      ||:.:.|..  ||:.:.......|..::   |:...:| 
plant   266 GAESD--------C--EVHE------AINLSDDAG--GEANISHEMQHLSCRES---NDSSGQP- 308

  Fly   628 PSAPNGELLFTEKYKPLLFEQVLVNLTPVQELREFLSSWSGNGG-------SNRNSQGMDDTFDM 685
                 ...|:.:||:|....:|..|...|:.:.|:|..|...|.       |:...:..|..::.
plant   309 -----CNRLWVDKYQPRSASEVCGNTESVKVMNEWLRQWYERGFQPNKDFLSSDEDKSQDADYNC 368

  Fly   686 S---NDSASMG---SSSNTMVLVGPSSSGKTNAVFTLANDMNFNVLEINAGMKRTGKKLIQELQE 744
            |   :||...|   |..|.:::|||:.|||:.|:...|.:..|.:||.|....|:|..:.|:..|
plant   369 SESDSDSEKSGAEDSQKNVLLIVGPAGSGKSAAIHACAKEQGFKILESNTSECRSGTVVRQKFGE 433

  Fly   745 ATQSHQIRK------DGKAGGGSSQQLLQKLQKSGLKAKAAAVEPPSEVRKSLILIEDADILFDN 803
            |.:|:.:.:      :....|...:.:::.:....::...|.::|       |||.||.||.|..
plant   434 ALKSYSLSRSLDPLFNSCTDGNGVEDVVEVMPVLHIQNDGANLKP-------LILFEDVDICFAE 491

  Fly   804 LDAGFTDAIYTLAASSKRPVIVVATDPNCA---HLQRLMQQNIIHFQAPNALNISRFLAVLSLME 865
             |.|...||..:|..:|.||::.|.|.|..   :|:|:.    |:|..|:...:...|:::...|
plant   492 -DRGLVSAIQQIAVKAKGPVVLTANDKNHGLPDNLERIE----IYFSLPSKEELFNHLSLVCAAE 551

  Fly   866 NCPIELDELISVYLYNQQNLRKTLMELQFYIQS-----------GGDSTRDRTGGGIKSP 914
            ...:....|..:..:...::||.:|:|||:.||           |.....|...|.:..|
plant   552 EVKVNHGSLEEMTTFCGGDIRKAIMQLQFWFQSKPKRARKVKNTGNQDLFDHEAGHLLLP 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elg1NP_996103.1 Selenoprotein_S <57..129 CDD:284376
P-loop_NTPase 699..828 CDD:304359 37/134 (28%)
AT1G77620NP_177885.1 AAA 380..>436 CDD:99707 19/55 (35%)
AAA 384..535 CDD:214640 45/162 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5275
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004592
OrthoInspector 1 1.000 - - oto3833
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

Return to query results.
Submit another query.