Sequence 1: | XP_016864951.1 | Gene: | LIFR / 3977 | HGNCID: | 6597 | Length: | 1115 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001284756.1 | Gene: | sdk / 31017 | FlyBaseID: | FBgn0021764 | Length: | 2265 | Species: | Drosophila melanogaster |
Alignment Length: | 1246 | Identity: | 229/1246 - (18%) |
---|---|---|---|
Similarity: | 419/1246 - (33%) | Gaps: | 380/1246 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 30 SWMVDNKRMRTASNFQWLL-----STFILLYLMNQVNSQKKGAPHDLKCVTNNLQVWNCSWKAPS 89
Human 90 GTGRG------------TDYEVCIE-------------------NRSRSCYQ-----LEKTSIKI 118
Human 119 PALSHGDYEITINSLHDFG----SSTSKFTLNEQNVSLIPDTPEILNLSADFSTST-LYLKWNDR 178
Human 179 GSVFPHRSNVI--------WEIKVLRKESMELVK------------LVTHNTTLNGKDTLHHWSW 223
Human 224 ASDMPLECAIHFVEIRCYID-----------------------NLHFSGLEEWSDWSPVKNISWI 265
Human 266 PDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGT 330
Human 331 NVVFTTEDNIFGTVIFAGYP-------------PDTPQQLNCETHDLKEIICSWNPG-------- 374
Human 375 --RVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRS 437
Human 438 QSTILVNITEKVY---PHTPTSFKVKDINSTAVKLSWHLP-------GNFAKINFLCEIEIKKSN 492
Human 493 SVQ-EQRNVTIKGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEASPSKG 556
Human 557 PDTWREWSSDGKNLIIYWKPLPINEANGKILSYNVSCSSDEETQSL--SEIPDPQHKAEIRLDKN 619
Human 620 DYI---ISVVAKNSVG----SSPPSKIASME----------IPNDDLKIEQVVGMGKGILLTWH- 666
Human 667 -YDPN-----MTCDYVIK---WCNSSRSEPCLMDWRKVPSNSTETVIESDEFRPGIRYNFFLYGC 722
Human 723 RNQGYQLLRSMIGYI-----EELAPIVAPNFTVEDTSADSILVKWEDIPVEELRGF--LRGYLFY 780
Human 781 FGKGERDTSKMRVLESGRSDIKVKNITDISQKTLRIADLQGKTSYHLVLRAYTDGGVGPEKSMYV 845
Human 846 VTKENSVGLIIAILIPVAVAVIVG-------VVTSILCYRKREWIKETFYPDIPNPENCKALQFQ 903
Human 904 KSVCEGSSALKTLEMNPCTPNNVEVLETRSAFPKIEDTEIISPVAERPEDRSDAE--PENHVVVS 966
Human 967 ----------------------YCPP---IIEEEIP--NPAADEAGGTAQVIYIDVQSMYQPQAK 1004
Human 1005 PEEEQENDPVGG------AGYKPQMHLPINSTVEDIAAEED---------LDKTAGYRPQANVNT 1054
Human 1055 WNLVSPDSPRS 1065 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LIFR | XP_016864951.1 | None | |||
sdk | NP_001284756.1 | Ig | 71..157 | CDD:299845 | |
I-set | 72..150 | CDD:254352 | |||
Ig | 172..245 | CDD:299845 | |||
IG_like | 280..356 | CDD:214653 | |||
Ig | 280..343 | CDD:299845 | |||
IG_like | 375..450 | CDD:214653 | |||
Ig | 378..447 | CDD:143165 | |||
Ig | 506..587 | CDD:299845 | |||
IG_like | 506..587 | CDD:214653 | |||
I-set | 592..682 | CDD:254352 | |||
Ig | 595..682 | CDD:299845 | |||
FN3 | 686..789 | CDD:238020 | 7/49 (14%) | ||
FN3 | 798..893 | CDD:238020 | 13/94 (14%) | ||
FN3 | 901..1005 | CDD:238020 | 15/120 (13%) | ||
fn3 | 1011..1094 | CDD:278470 | 16/109 (15%) | ||
FN3 | 1108..1202 | CDD:238020 | 19/106 (18%) | ||
FN3 | 1210..1308 | CDD:238020 | 21/102 (21%) | ||
fn3 | 1317..1402 | CDD:278470 | 15/84 (18%) | ||
FN3 | 1415..1507 | CDD:238020 | 21/111 (19%) | ||
FN3 | 1513..1608 | CDD:238020 | 29/121 (24%) | ||
fn3 | 1617..1708 | CDD:278470 | 20/130 (15%) | ||
FN3 | 1722..1823 | CDD:238020 | 26/104 (25%) | ||
FN3 | 1828..1920 | CDD:238020 | |||
FN3 | 1927..2016 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |