DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and AT1G80500

DIOPT Version :10

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_178165.2 Gene:AT1G80500 / 844389 AraportID:AT1G80500 Length:135 Species:Arabidopsis thaliana


Alignment Length:136 Identity:62/136 - (45%)
Similarity:87/136 - (63%) Gaps:3/136 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRF 66
            :|..|:|||:||.||||.|   |....::||...|.|||.|||||:|.:..|.|:.|.|||:|||
plant     3 NTACFIIVGRNDIPIYEAE---VGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKSVDRF 64

  Fly    67 NQWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSPMFEKKSEI 131
            |...||.::||...|.:::||::|::|||:||.|:::.|||..:|..|...:.|.|..|:.|...
plant    65 NDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRA 129

  Fly   132 FGRKYL 137
            ..||||
plant   130 LARKYL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 TRAPPC2_sedlin 3..137 CDD:341429 60/133 (45%)
AT1G80500NP_178165.2 TRAPPC2_sedlin 4..135 CDD:341429 60/133 (45%)

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