DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and AT2G20930

DIOPT Version :10

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_565493.1 Gene:AT2G20930 / 816627 AraportID:AT2G20930 Length:140 Species:Arabidopsis thaliana


Alignment Length:140 Identity:34/140 - (24%)
Similarity:63/140 - (45%) Gaps:25/140 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRFNQWF-- 70
            :||..:||:|.:.|:..:..|:       ...|.|.:||:::|.    .|...||....|:.|  
plant     7 VVGHQNNPLYIQSFTDADDALK-------LHHIVHCSLDVIEER----VNNPKKSGTTLNEAFLG 60

  Fly    71 ---------VSAFITASQIRFIIVHDNKN--DEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSPM 124
                     |..::|.::::||:|..:.:  |..:::||.:.:..|:....|.|:.....|.|..
plant    61 LLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGKKITSRT 125

  Fly   125 F-EKKSEIFG 133
            | :..|.|.|
plant   126 FAQTVSNIVG 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 TRAPPC2_sedlin 3..137 CDD:341429 34/140 (24%)
AT2G20930NP_565493.1 TRAPPC2L 3..135 CDD:341444 33/138 (24%)

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