DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and TRAPPC2

DIOPT Version :10

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001122307.2 Gene:TRAPPC2 / 6399 HGNCID:23068 Length:174 Species:Homo sapiens


Alignment Length:137 Identity:80/137 - (58%)
Similarity:108/137 - (78%) Gaps:0/137 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRFN 67
            ::||||||.:|||::|.||....|...|:|||||.|||||||||||||:.|.:.||.||::|:||
Human    38 SFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFN 102

  Fly    68 QWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSPMFEKKSEIF 132
            :||||||:||..:|||::||.:.::||||||.::||.|||.|||.||..|:||:|..|::|.:..
Human   103 EWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSPIRSSAFDRKVQFL 167

  Fly   133 GRKYLLS 139
            |:|:|||
Human   168 GKKHLLS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 TRAPPC2_sedlin 3..137 CDD:341429 77/133 (58%)
TRAPPC2NP_001122307.2 TRAPPC2_sedlin 38..172 CDD:341429 77/133 (58%)

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