DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and TRAPPC2L

DIOPT Version :10

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001305453.1 Gene:TRAPPC2L / 51693 HGNCID:30887 Length:146 Species:Homo sapiens


Alignment Length:129 Identity:31/129 - (24%)
Similarity:62/129 - (48%) Gaps:25/129 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDR------- 65
            ::.:.:.|:|.:...|.| ||:       ..::.|.:||:|||   |.:.|....:|:       
Human     7 VIAKENYPLYIRSTPTEN-ELK-------FHYMVHTSLDVVDE---KISAMGKALVDQRELYLGL 60

  Fly    66 ---FNQWFVSAFITASQIRFIIVHDNKN----DEGIKNFFNEMYDTYIKNSMNAFYRINTPIKS 122
               ...:.|..::|.|:::|::|.|:.|    |..|::.|.:::::|.....|.||.....|:|
Human    61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQS 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 TRAPPC2_sedlin 3..137 CDD:341429 31/129 (24%)
TRAPPC2LNP_001305453.1 TRAPPC2L 3..142 CDD:341444 31/129 (24%)

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