DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and trs20

DIOPT Version :9

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_595722.1 Gene:trs20 / 2539833 PomBaseID:SPBC11G11.04 Length:136 Species:Schizosaccharomyces pombe


Alignment Length:135 Identity:55/135 - (40%)
Similarity:92/135 - (68%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRFN 67
            |.|..|:|..|||:||.|...:|::|.:..:.||.|||.|::||:||:.:|.:....:|:||:|:
pombe     2 TAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKTIDQFH 66

  Fly    68 QWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSPMFEKKSEIF 132
            :.::||::|.|.:||:::|.|::.:.||.||.|:::.|||..|:.||:.|.||:|..|:.|....
pombe    67 EMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIRSQAFDLKVRSI 131

  Fly   133 GRKYL 137
            .|:||
pombe   132 ARRYL 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 Sedlin_N 8..135 CDD:282482 50/126 (40%)
trs20NP_595722.1 TRS20 1..136 CDD:227890 53/133 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1455
eggNOG 1 0.900 - - E1_COG5603
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5436
Inparanoid 1 1.050 128 1.000 Inparanoid score I1437
OMA 1 1.010 - - QHG54366
OrthoFinder 1 1.000 - - FOG0002766
OrthoInspector 1 1.000 - - oto101576
orthoMCL 1 0.900 - - OOG6_102292
Panther 1 1.100 - - LDO PTHR12403
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1554
SonicParanoid 1 1.000 - - X1852
TreeFam 1 0.960 - -
1413.860

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