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Protein Alignment SsRbeta and Ssr2
DIOPT Version :9
Sequence 1: | NP_524103.2 |
Gene: | SsRbeta / 39768 |
FlyBaseID: | FBgn0011016 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099912.1 |
Gene: | Ssr2 / 295235 |
RGDID: | 1308365 |
Length: | 183 |
Species: | Rattus norvegicus |
Alignment Length: | 186 |
Identity: | 90/186 - (48%) |
Similarity: | 121/186 - (65%) |
Gaps: | 7/186 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LLTLFALCAVFSTCLSEDETRARLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAATKVRLVDSGF 69
::.:.||.|| |:.|..||||.||.:||:|.||..||.::|.|:||||.||..|.|.|..|
Rat 5 VVVVLALLAV-----SQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSF 64
Fly 70 HPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEESETLQLAVSSEP 134
.||.|.:|.|......|||||.:|.:|.:|:||...||||||:|.::|.|.|:...: :..:|.|
Rat 65 PPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVV-IGSTSAP 128
Fly 135 GEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLAIPLALWHQSKSKYERSGKNKKH 190
|:|||:...|:::|||.||.||.||.||||||:.|||.||:.||.||: :.|.||:
Rat 129 GQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKPKKN 183
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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