DRSC/TRiP Functional Genomics Resources

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Protein Alignment SsRbeta and SsRbeta

DIOPT Version :10

Sequence 1:NP_524103.2 Gene:SsRbeta / 39768 FlyBaseID:FBgn0011016 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_556532.2 Gene:SsRbeta / 1276528 VectorBaseID:AGAMI1_004217 Length:192 Species:Anopheles gambiae


Alignment Length:189 Identity:119/189 - (62%)
Similarity:146/189 - (77%) Gaps:0/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKHLLTLFALCAVFSTCLSEDETRARLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAATKVRLV 65
            |...|..|.||.||....|:.:|..|||||||.||||||||..|::|:||::|||||.|..||||
Mosquito     1 MKSFLYALLALLAVSQLGLANEENTARLLVSKHILNKYLVEARDIVVKYTLYNVGSGPAVNVRLV 65

  Fly    66 DSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEESETLQLAV 130
            |:|||||.|:|||||.||.:||||||||.||::|||||.:||.|||||||:|.|.|::...|.::
Mosquito    66 DNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPKQYGYLNFTAAEVNYLATEDATEPQFSI 130

  Fly   131 SSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLAIPLALWHQSKSKYERSGKNKK 189
            |||||||.||...::||:||||:.||:|||.:||||||||.|:|:.||||||..||:.|
Mosquito   131 SSEPGEGAIVAEAQFNKQFSSHYLDWLAFAFLTLPSLAIPYAMWYSSKSKYEAMGKSSK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsRbetaNP_524103.2 TRAP_beta 9..186 CDD:399046 113/176 (64%)
SsRbetaXP_556532.2 TRAP_beta 18..186 CDD:399046 109/167 (65%)

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