DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf4 and TAF4B

DIOPT Version :9

Sequence 1:NP_001137958.1 Gene:Taf4 / 39765 FlyBaseID:FBgn0010280 Length:1088 Species:Drosophila melanogaster
Sequence 2:NP_174093.3 Gene:TAF4B / 839665 AraportID:AT1G27720 Length:720 Species:Arabidopsis thaliana


Alignment Length:760 Identity:156/760 - (20%)
Similarity:298/760 - (39%) Gaps:170/760 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 QQSQQQQVNNVSSAGGTATAVSSTTAATTTQQGNTKEKCRKFLANLIELSTREPKPVEKNVRTLI 490
            |..|...:.::.  |....::::||       ||..||.:.....|.::|::|...|||.|    
plant    25 QMFQDSLIRDIE--GSNLKSINNTT-------GNESEKPQPRYMKLQKMSSKETPWVEKTV---- 76

  Fly   491 QELVNANVEPEEFCDRLERLLNASPQPCLIGFLKKSLPL-LRQALYTKELVIEGIKPPPQHVLG- 553
             :.||.|:......|.|..:::..|.       ||:..| |...|..|||.:|......:.::| 
plant    77 -DPVNHNLRLARVTDLLRTVVDHQPG-------KKTHCLNLHYKLKRKELTMEEFMRQLRDLVGD 133

  Fly   554 --LAGLSQQLPKIQAQIRP---------------IGPSQTTTIGQTQVRMITPNAL-GTPRPTIG 600
              :..:..|||    |::|               :..|...|..::..|.:..|.| .|...|:.
plant   134 QIIRSVISQLP----QLKPGNMGIKVPGRSNHDKVSKSAEFTAQESDPREVHVNQLSSTTSGTLN 194

  Fly   601 HTT----ISKQP-PNIRLPTAPRLVNT-GGIRTQIPSLQV--PGQANIVQIRGPQHAQ-LQRTGS 656
            .:|    ::|.| .:::||::...::| .|.....|...|  ||.::..::...||.: .|..|.
plant   195 SSTTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTNVTSPGSSSRAKLPDFQHRENNQNVGI 259

  Fly   657 VQIRATTRPP---NSVPTANKLTAVKVGQTQIK----------AITPSLHPPSLAAISGGPPPTP 708
            ..:...|:..   .:||...:.|.|. |.::::          :..|....|...:::......|
plant   260 ASVGGPTKSTINMTTVPKFERPTFVN-GPSRVQDGPISDFPKNSSFPLYSAPWQGSVTKDHTVGP 323

  Fly   709 TLSVLST-----------------LNSASTTTLPIPSLPTVHLPP----EALRAREQMQNSLNHN 752
            :.||:..                 |.....|.:|:.....:.:..    |...::..:..|....
plant   324 SSSVIHVEHKLIDQSFEQAHKPRYLVQQGVTNVPLKQKNAIPISSNDDLEKQSSKMGLFTSTTSA 388

  Fly   753 SNHF--------DAKLVEIKAPSLHPPHMERINASLTP----IGAKTMARPPPAINKAI--GKKK 803
            |:.|        .:.:|.:.|||...|.:  .|.::||    :|.|   :|..|:..::  .:||
plant   389 SSVFPSMTTQLDSSTMVNMPAPSETIPKI--ANVTVTPKMPSVGQK---KPLEALGSSLPPSRKK 448

  Fly   804 RDAMEMDAKLNTSSGGAASAANSFFQQSSMSSMYGDDDI---NDVAAMGGVNLAEESQRILGCTE 865
            :..      ..|||                     |:.|   |||.|:.|:||.||.:::|....
plant   449 QKI------CGTSS---------------------DESIEKFNDVTAVSGINLREEEKQLLDSGP 486

  Fly   866 NIGTQIRSC--------KDEVFLNLPSLQARIRAITSEAGLDEPSQDVAVLISHACQERLKNIVE 922
            ....::...        ::...|....||.::..|..::||.....||...:|...:||::.::.
plant   487 KKNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIMGKSGLKHIDHDVERCLSLCVEERMRGLLF 551

  Fly   923 KLAVIAEHRIDVIKLDPRYEPAKDVRGQIKFLEELDKAEQKRHEELEREMLLRAAKSRSRVEDPE 987
            .:..|::.|.|..|...|.....|:|      :|:::..||..||.|::   .:.:.:::..|.|
plant   552 NIIRISKQRTDAEKCRNRTFITSDIR------KEINEMNQKVKEEWEKK---HSGEEKNKENDTE 607

  Fly   988 QAKMKARAKEMQRAEMEELRQRDANLTALQAIGPR---KKLKLDGET---VSSGAGS-----SGG 1041
            :...::...:..:.:.::.|.:.||:....|:|..   .|.||..|.   .|.|.|.     |||
plant   608 KEDQRSNEVKANKKDEDKERAKAANVAVRAAVGGDDRFSKWKLMAEARQRSSPGPGRNSKKLSGG 672

  Fly  1042 GVLSSSGSAPTTLRPRIKRVNLRDMLFYMEQEREFCRSSMLFKTY 1086
            .....:...|..:|    .::::|::..:|:|.:..||::|::.|
plant   673 TQFGKNQGLPKVVR----SISVKDVIAVVEKEPQMSRSTLLYRVY 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf4NP_001137958.1 TAFH 460..550 CDD:197785 24/90 (27%)
TAF4 842..1084 CDD:283017 60/263 (23%)
TAF4BNP_174093.3 RST 89..144 CDD:288985 14/61 (23%)
TAF4 463..711 CDD:283017 59/260 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 67 1.000 Domainoid score I3516
eggNOG 1 0.900 - - E1_KOG2341
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2381
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001841
OrthoInspector 1 1.000 - - otm3435
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15138
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.960

Return to query results.
Submit another query.