DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf4 and si:dkey-219c3.2

DIOPT Version :9

Sequence 1:NP_001137958.1 Gene:Taf4 / 39765 FlyBaseID:FBgn0010280 Length:1088 Species:Drosophila melanogaster
Sequence 2:XP_005163125.1 Gene:si:dkey-219c3.2 / 564106 ZFINID:ZDB-GENE-090313-238 Length:976 Species:Danio rerio


Alignment Length:1196 Identity:342/1196 - (28%)
Similarity:468/1196 - (39%) Gaps:423/1196 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IKTIQAGIGGQHQ--GLQ--------------------QVHHVQQQQQSQQQQQQQQQ------- 80
            :.::::.:|||::  |.|                    ||....:|||.|:|.::.|:       
Zfish    52 VGSLESQLGGQNKTVGPQGDARRASNALNPHLGKLLPAQVGTTLEQQQRQRQAERNQEGNSQENG 116

  Fly    81 ------------TQSVGATQTQTLVIKSN---HHAVTLPAGLVSSAPA---------GIVTMTKT 121
                        |.::.|..:..||..:|   :|: :.|:...|.|.|         .|....:|
Zfish   117 PDRIPASNCVPATANLPANTSANLVPAANLAQYHS-SNPSTCSSDAAAPTDSHPNTNHIACAVRT 180

  Fly   122 INQAGQPL------LNSML----PA---GVVVG--------MRQQAPSQQQQKNVPTNPLSRV-- 163
            :....||:      |||.:    ||   |:.||        ....||:......||..|.|.:  
Zfish   181 VPARTQPVNGSSSTLNSSVIASAPASVNGIDVGSGGGSGNKSNMSAPTSTNTAFVPAQPNSTLPH 245

  Fly   164 -------VINSHMAGVRPQSPSITLSTLNTGQTP---------ALLVKTDNGF-----------Q 201
                   ..|..:|..||  |:...|.::.|..|         |.||.|...|           |
Zfish   246 ANVSLDSQANPTIALHRP--PNTITSVVHNGGDPKVSGLPVQGAALVPTPVAFTNTEPKSDPQNQ 308

  Fly   202 LLRV------GTTTG--PPTVTQTITNTSNNSNTTSTTNHPTTTQIRLQTVPAAAVSRYQQQQQH 258
            :..:      |...|  |.|.||.|.::|           |..|.:.:.:.|:|           
Zfish   309 IKAIVPNQLPGAPVGLHPSTPTQIIVSSS-----------PVVTSLPVASTPSA----------- 351

  Fly   259 QQQSQQQQQSQQQQHATSTTASTSIALRKTIVRTSSTVPSSNNNNNSINATTNTTTTTTTNNNNK 323
                           ....||:..:....|::|.::             .|..|.|.|.......
Zfish   352 ---------------LPKPTATALVGQPTTLLRPAT-------------PTQGTPTATPQQRPGA 388

  Fly   324 PATN---QQQQQQKLQ------------------------QQQHL---KAQQQQKQQQASAAAAA 358
            |.|.   :..||..:|                        .||.|   |||.|.| ...|...|.
Zfish   389 PTTQLIVRPPQQTTIQLPPGFTIPPGMVLVRTEAGQLALVPQQVLAQAKAQNQNK-GTLSPRPAT 452

  Fly   359 AAAAANVAATIKIKQNSMTNTTATSNIIVNSVASSGYANSSQPPHLTQLNAQAPQLPQITQIQTI 423
            ..|.|....|..:.|......|.|               |:|.|..|.:.|.|       ::|  
Zfish   453 PTAGAPFRVTTPVAQQKTAVVTIT---------------SAQKPTTTVITAGA-------RVQ-- 493

  Fly   424 PAQQSQQQQVNNVSSAGGTATAVSSTTAATTTQ--QGNTKEKCRKFLANLIEL-STREPKP-VEK 484
            ||.|:..:......|.......||:..|...:|  |.|.| ||:.|||.||:| |...|.| ..:
Zfish   494 PAPQTVLKPSVTPQSPVTPPVTVSANRAPVLSQEMQENVK-KCKNFLATLIKLASHNSPSPETSR 557

  Fly   485 NVRTLIQELVNANVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQALYTKELVIEGIKPPPQ 549
            ||:.|:|:|::|.:|||||.:||:..|.:||||.||.|||||||.||..|..             
Zfish   558 NVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALRLTLLN------------- 609

  Fly   550 HVLGLAGLSQQLPKIQAQIRPIGPSQTTTIGQTQVRMITPNALGTPRPTIGHTTISKQPPNIRLP 614
                    |||              ..|.:.||......|                       ||
Zfish   610 --------SQQ--------------SLTQLSQTSATAAAP-----------------------LP 629

  Fly   615 TAPRLVNTGGIRTQIPSLQVPGQANIVQIRGPQHAQLQRTGSVQIRATTRPPNSVPTANKLTAVK 679
                 |||  |:...||                      |.|..||.||                
Zfish   630 -----VNT--IKAPAPS----------------------TLSTTIRPTT---------------- 649

  Fly   680 VGQTQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPIPSLPTVHLPPEALRAREQ 744
                   |:||:   .:||....|...||             |.:|:....||       ||:..
Zfish   650 -------ALTPA---SALAVKRPGVQTTP-------------TRMPVVITQTV-------RAQGA 684

  Fly   745 MQNSLNHNSNHFDAKLVEIKAPSLHPPHMERINASLTPIGAKTMARPPPAINKAIGKKKRDAMEM 809
            :...|...|                            |:|.        ||:.:..:|:      
Zfish   685 IGTPLQVRS----------------------------PMGV--------AIHASANQKQ------ 707

  Fly   810 DAKLNTSSGGAASAANSFFQQSSMSSMYGDDDINDVAAMGGVNLAEESQRILGC-TENIGTQIRS 873
              |||...||               :...||||||||:|.||||.||:.|||.. :|.:||||||
Zfish   708 --KLNDPGGG---------------TFRDDDDINDVASMAGVNLNEENARILATGSELVGTQIRS 755

  Fly   874 CKDEVFLNLPSLQARIRAITSEAGLDEPSQDVAVLISHACQERLKNIVEKLAVIAEHRIDVIKLD 938
            ||||.||....|..|:.....:.|:.|.|.:...|||||.|.||::::||::.:|:||.|..|.:
Zfish   756 CKDEAFLPASLLHKRLLETAKKFGVTEVSMETVTLISHATQSRLRSMLEKVSAVAQHRADSCKDE 820

  Fly   939 PRYEPAKDVRGQIKFLEELDKAEQKRHEELEREMLLRAAKSRSRVEDPEQAKMKARAKEMQRAEM 1003
            ..||...|||.|:||.|:|:|.|::|.::.|||:|::|||||||.||||||::|.:|||||:.|:
Zfish   821 DLYEQTSDVRTQLKFFEQLEKIEKQRKDDEERELLMKAAKSRSRQEDPEQARLKQKAKEMQQQEL 885

  Fly  1004 EELRQRDANLTALQAIGPRKKLKLDGETVSSG----AGSSGG--GVLSSSGSAPTTLRPRIKRVN 1062
            .::||||||||||.|||||||.|||....|:|    |||||.  |..|||.|:....|.||.|||
Zfish   886 AQMRQRDANLTALAAIGPRKKRKLDSPGASAGAELPAGSSGSATGSTSSSSSSVRQTRQRITRVN 950

  Fly  1063 LRDMLFYMEQEREFCRSSMLFKTYLK 1088
            |||::|.:||||...||::|:|..||
Zfish   951 LRDLIFCLEQERTTARSTLLYKALLK 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf4NP_001137958.1 TAFH 460..550 CDD:197785 42/91 (46%)
TAF4 842..1084 CDD:283017 134/248 (54%)
si:dkey-219c3.2XP_005163125.1 TAFH 531..616 CDD:284862 46/120 (38%)
TAF4 723..973 CDD:283017 134/249 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586693
Domainoid 1 1.000 247 1.000 Domainoid score I2122
eggNOG 1 0.900 - - E1_KOG2341
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 298 1.000 Inparanoid score I2693
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D322413at33208
OrthoFinder 1 1.000 - - FOG0001841
OrthoInspector 1 1.000 - - otm25787
orthoMCL 1 0.900 - - OOG6_105779
Panther 1 1.100 - - O PTHR15138
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4777
SonicParanoid 1 1.000 - - X2359
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.880

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